Escherichia fergusonii: EFER_1056
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Entry
EFER_1056 CDS
T00811
Symbol
ihfB
Name
(GenBank) integration host factor (IHF), DNA-binding protein, beta subunit
KO
K05788
integration host factor subunit beta
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efe03032
]
EFER_1056 (ihfB)
03036 Chromosome and associated proteins [BR:
efe03036
]
EFER_1056 (ihfB)
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_1056 (ihfB)
DNA replication proteins [BR:
efe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EFER_1056 (ihfB)
Chromosome and associated proteins [BR:
efe03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EFER_1056 (ihfB)
DNA repair and recombination proteins [BR:
efe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EFER_1056 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
MDMPI_C
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
CAQ88585
UniProt:
B7LN74
LinkDB
All DBs
Position
1091336..1091620
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AA seq
94 aa
AA seq
DB search
MTKSELIERLATQQSHIPAKVVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgattgaaagacttgcaacccagcaatcgcatattcctgccaaa
gtggttgaagatgccgttaaagagatgctggagcatatggcctcgactcttgcgcagggc
gagcgtattgaaatccgcggtttcggcagtttctctttgcactaccgcgcacctcgcacc
ggacgtaacccaaaaactggtgataaagttgaacttgaaggcaaatatgtgccgcacttt
aagccaggtaaagaactgcgcgatcgcgccaatatttacggttga
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