Escherichia fergusonii: EFER_1138
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Entry
EFER_1138 CDS
T00811
Name
(GenBank) conserved hypothetical protein
KO
K07347
outer membrane usher protein
Organism
efe
Escherichia fergusonii
Pathway
efe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EFER_1138
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
efe02000
]
EFER_1138
02044 Secretion system [BR:
efe02044
]
EFER_1138
02035 Bacterial motility proteins [BR:
efe02035
]
EFER_1138
Transporters [BR:
efe02000
]
Other transporters
Pores ion channels [TC:
1
]
EFER_1138
Secretion system [BR:
efe02044
]
Chaperone-usher system
Type 1 pilus assembly protein
EFER_1138
Bacterial motility proteins [BR:
efe02035
]
Pilus system
Fimbrial proteins
EFER_1138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
PapC_N
Motif
Other DBs
NCBI-ProteinID:
CAQ88666
UniProt:
B7LP10
LinkDB
All DBs
Position
1178368..1180755
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AA seq
795 aa
AA seq
DB search
MAVSAHQVRGVVMILIITSSVPERGMADDDLLPPPPNAHAFEQQAIFHLALVINYYDTQQ
VVPVTQRNGDFYLSRADLMRAGLPAEQLPLGEVNVSRLTQVNAEYDSSGQRLLLTVPRSW
LPERITPFAGEAEPQTAHHGSGVLLNYDFYNSKTQNGSGQATLSHELRFFNDAGSLSSTG
FWRQRLSGADDLQEGYVRYDTTFTATNEQQATQWRVGDVISDALSWSSSVRLGGVYWGRD
FSLRPDLVTWPLPTFSGEAAVPTAVDLFINGYRAGSTSLQPGPFTLTNLPYINGAGDAVL
VTQDAAGRQVTTSLPFYVASNLLKPGMSDGALSFGALRREYGIDSFNYGPAAASASYRYG
VSDFLTLEGHSEVAEELALGGAGAVVKLGYFGVVNGAYSESRMHGRSGNQINWGYQYSTA
AFSVATQHTRRERGFGNLALYDNVVQVDENNVPLATLSQQSDQYSLSFNMGELGNVGAAW
IGVRSFDAQKTELLNLSWSRNLWGSSSVYLAASRDWQQGGWTVAMSVQIPLGERDSAAFT
MEKMPDGGQTQRINYNHSMPTDGGFSWNLAWARQSEASNYKQATLGWRNDHLELQGGTWG
ESGNMTWWGEALGAFVWMEQQLFAANKINDAFVVVSTDGQAGVPVNYENQPVGETNRDGY
LLISGVSAYYPASYSINTLNLPADIRLKETERKVALRRQSGYLVDFPMDQQQVASVILHD
EKGQILPVGSEILLNNQTSAVVGYDGIVWLENLAPVNLLHAITPDGKQCQTRLSLTPNPQ
HKLKTYGPLVCRSGS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagcgcccaccaggtaagaggcgtggtgatgatactgattatcaccagcagt
gtgcctgagcgtggaatggccgacgacgatctgttaccgcctccaccaaatgctcatgcc
tttgagcaacaggcgatttttcatctcgctctggtcattaactattacgacactcagcag
gtggtgccagtgactcagcgaaacggtgatttttatctctccagggcggatctgatgcgt
gccggactgcccgccgaacagcttcccttaggtgaagttaatgtttcccgcctgacccag
gttaatgcagagtacgacagcagcggtcagcgactgcttttaaccgttccgcgtagctgg
ctgccggagcggattacgccatttgccggagaagccgaaccgcaaaccgctcatcatggt
agcggcgtactactgaattacgacttctataacagcaaaacgcaaaatggcagtggtcag
gctactctctcgcatgaactgcgctttttcaacgatgcgggatcactttcttccacagga
ttctggcgtcagagactttccggagctgacgatttgcaagaaggttacgtgcgttatgac
accactttcaccgccaccaatgaacaacaggcgacccagtggcgagtcggggatgtgata
agtgatgcattaagctggagcagcagtgtgcgccttggtggtgtttactgggggcgtgat
ttttctctgcgccctgatctggtgacctggccgctgccgacgttttccggcgaagccgca
gtccctacagcggtagatttgtttattaatggttatcgtgcaggatcaaccagtttgcaa
cctggcccattcaccctgaccaatttgccatatatcaacggtgccggagatgcggtattg
gtcactcaggacgctgccggacggcaagtcactacttcgttgcctttttatgttgccagt
aatttgcttaaacccggaatgagtgatggggcactatcttttggcgcattgcgtcgtgaa
tatggcattgacagcttcaactacggcccggcggcggccagtgcttcttatcgttatggc
gtcagcgattttctgactttagaaggtcacagcgaagtcgctgaagaattagcactcggt
ggggcgggggcagtcgtgaaactggggtactttggcgttgtgaatggtgcctacagcgaa
agccggatgcatggacgcagcggcaaccagatcaactggggatatcagtacagtacggca
gcattcagtgtggcgacgcaacatacccgccgtgaacgcggatttggtaacctggcgctg
tacgataacgtcgttcaggtcgatgaaaataatgtaccgttagcgacgctcagccaacaa
agcgatcaatattcactttcctttaatatgggggaattgggcaatgtgggcgctgcatgg
attggagtgcgcagtttcgatgcacaaaaaactgaattgctgaatctctcctggagtcgc
aatttgtgggggagtagtagcgtttatctggcggccagtcgtgactggcagcagggtggc
tggacagtggcaatgtctgtacagattccgttgggtgagcgcgacagtgctgcgttcacc
atggaaaaaatgccggatggcgggcaaacacaacgtattaactacaatcactcaatgcca
actgatggcggctttagctggaatcttgcatgggcaaggcaatctgaagccagtaattac
aagcaagcgactttgggctggcgtaatgatcatctggaactgcaaggtggcacatgggga
gaaagtggcaatatgacctggtggggcgaggcactgggagcgtttgtatggatggagcag
caactgtttgccgccaataaaattaacgatgcctttgtggtggtgagtactgatggacaa
gctggcgtcccggttaattatgagaatcagcctgttggagaaaccaaccgtgatggctat
ttattgatcagtggtgtgtccgcttattatcccgccagttacagcattaataccttgaat
cttccggcagatatccgcctgaaagagactgagcgaaaagtagcactgcgacggcagagt
ggttacctggtggatttccccatggatcagcaacaagtcgccagcgtgatcctgcatgat
gagaaaggccaaatactgccagtgggaagtgagattttgctgaacaatcagacttcagca
gttgtgggttatgacggtatcgtctggctggaaaatttagcgccagttaatctactgcac
gccatcacaccggatggcaaacaatgtcaaacacgcttatcgttgacgcccaatccgcaa
cataaattaaaaacttacggtccgttggtttgccggagtggatcatga
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integrated database retrieval system
