Escherichia fergusonii: EFER_1365
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Entry
EFER_1365 CDS
T00811
Symbol
ydiJ
Name
(GenBank) putative conserved FAD-linked oxidoreductase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
efe
Escherichia fergusonii
Pathway
efe00310
Lysine degradation
efe01100
Metabolic pathways
efe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
EFER_1365 (ydiJ)
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Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_20
Fer4_17
Fer4_18
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
CAQ88886
UniProt:
B7LQ89
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All DBs
Position
1401028..1404084
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AA seq
1018 aa
AA seq
DB search
MIPQISQAPGIVQLVVNFLQELEQQGFTGDTATSYAERLTMSTDNSIYQLLPDAVVFPRS
TADVALIARLAAQERYTSLIFTPRGGGTGTNGQALNQGIIVDMSRYMNRIIEINPEEGWV
RVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGV
RAVLLGGDILDTQPLPVELAETLGKTNTTIGRIYNTVYQRCRQQRQLIIDKFPKLNRFLT
GYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEAQLDITRLPKVRRLVNVKYDSFDSALR
NAPFMVEARALSVETVDSKVLNLAREDIVWHSVSELITDVPDKQMLGLNIVEFAGDDEAL
IDQQVNALCARLDELIASQQAGVIGWQVCSELAGVERIYAMRKKAVGLLGNAKGAAKPIP
FAEDTCVPPEHLADYIAEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEILMKQ
ISDDVVALTAKYGGLLWGEHGKGFRAEYSPAFFGEELYGELRKVKAAFDPQNRLNPGKIC
PPEGIDAPMMKVDAVKRGTYDRQIPIAVRQQWRGAMECNGNGLCFNFDARSPMCPSMKIT
QNRIHSPKGRATLVREWLRLLADRGVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEY
DFSHEVKEAMSGCLACKACSTQCPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYA
PLMARAPKTFNFFINQPLVRKLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLENL
TTEQKARTVLVVQDPFTSYYEAQVVADFVRLIEKLGFQPVLLPFSPNGKAQHIKGFLSRF
TKTAKKTSELLNRVAQLGMPMVGVDPALVLCYRDEYKLALGEKRGDFHVMLVNEWLSSVL
ESVPTREMSGETWYFFGHCTEVTAIPGAPAQWATIFARFGAKLDNVNVGCCGMAGTYGHE
AKNHKNSLGIYELSWHQAMEKLPRQRCLATGYSCRSQVKRIEGTGVRHPLQALLELMK
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacaaatttctcaggctcccggcatcgttcagctggtggtcaattttttgcaa
gaactggagcaacaagggtttactggcgacacggcaacaagttatgccgaacgtttaacg
atgtcgacggacaatagcatctatcagttgcttcctgacgcagtagtgtttccacgttcg
acggctgatgtggcacttattgcccgtcttgctgctcaggaacgctacacatccctgatc
tttactccccgtggtggtggcactggcactaacggtcaggcgcttaatcaggggattatt
gttgatatgtcccgctatatgaaccgcatcatcgaaatcaatcctgaagaggggtgggtg
cgcgtggaagctggggtgattaaagatcaactcaatcagtatttgaaaccatttggctac
ttttttgcgccagaactttcgaccagcaatcgcgcaacgctcggcgggatgatcaatacc
gatgcctccggtcagggctctttagtgtatgggaaaacatcagatcatgtgcttggtgtg
cgggcagttttactgggtggcgatattcttgatactcagcctttgcctgttgaactggcg
gaaacactcggcaaaaccaataccactatcgggcgtatctacaacactgtttatcaacgt
tgccgtcagcaacgccagttaattatcgacaaattccccaaacttaaccgttttctgact
ggttacgatctgcgtcatgtctttaacgacgagatgaccgagtttgacctgactcgcatt
ctcaccggttcagaaggaacactggcatttattactgaggctcagctggatataactcgc
ttgcctaaagtgcgccgtctggtaaacgtgaagtatgattcgtttgattccgcgctgcgt
aacgcaccgtttatggtcgaagctcgggcgctttcggtagagacagtggactctaaagtg
cttaacctggcgcgggaagatatcgtctggcattccgtcagtgaactgattaccgatgta
cccgacaaacagatgctcgggctaaacattgttgaatttgccggagacgatgaagcactt
atcgatcagcaggtgaatgcgctctgtgcgcggctggatgaacttatcgccagccagcaa
gcaggtgtgatcggctggcaggtatgcagtgagctggcaggtgttgagcgtatttatgcc
atgcgcaaaaaagccgtcggcctgctcggtaatgccaaaggagcagccaaaccgattccg
tttgctgaggatacctgcgtaccgccggaacatctggcggattatattgctgaatttcgc
gcgctgctcgacagccacggcttaagctacggtatgttcggtcacgtcgatgcaggtgtc
ttgcacgtccgtccggcgctggatatgtgcgatccacaacaagagattttgatgaagcaa
atctctgatgatgtagtggcgttgactgcgaaatacggtggtttgttgtggggcgaacat
ggtaaaggttttcgtgccgaatacagcccggcgttttttggagaggaactttacggcgaa
ttacgtaaagtcaaagcggcatttgatccacaaaaccggctcaacccagggaaaatttgc
ccaccggaaggtatcgacgcgcctatgatgaaagtggatgcggtgaagcgtggcacatat
gaccggcagatccccatcgcggtacgccagcagtggcgtggtgcaatggagtgtaacggc
aacggtttatgcttcaactttgatgcccgcagtccgatgtgcccgtcgatgaagattacc
cagaaccggattcattcaccgaaagggcgcgcaacgctggtgcgtgagtggctgcgtttg
ttggcagatcgcggcgttgacccactcaaactggaacaagagctgcctgaatccggcgtc
agtctgcggacgttaattgcccgtacgcgtaatagctggcatgcgaataaaggcgaatat
gacttctcccatgaagtcaaagaggcgatgtctggttgcctggcctgtaaagcgtgttcg
actcagtgcccaatcaaaattgacgtgcctgagtttcgttctcgcttcctgcaactctat
cacacccgttatttgcgtcccctgcgcgaccacctcgtcgccacggtcgagagctatgca
ccgctgatggcacgtgcgccgaagacttttaacttcttcattaaccagccgctggtgcgc
aaactctccgaaaaacatatcggcatggttgatttgccgctgctgtcggtgccatcgctg
caacaacaaatggtggggcatcgctcggcgaatatgacgctggagcaactggagaatctg
actacagaacaaaaggcacggaccgtgctggtggtgcaggacccgtttaccagctattac
gaagcccaggtggtggctgattttgttcgtcttatcgagaaattaggttttcagccagtg
ttgcttccattctcaccaaacggtaaagcccagcatataaagggcttcctgagtcgtttt
actaaaacggcgaaaaaaacctcagagttacttaaccgtgtcgcacaattgggaatgcct
atggtgggcgtagatccagcactggtgctttgttatcgggatgaatacaaactggcgctg
ggcgaaaagcggggggatttccatgtcatgctggtgaatgaatggctttcatccgtactg
gaatctgtgccgacacgtgaaatgagtggcgagacctggtatttctttggccattgtacc
gaagttactgccataccgggcgcgccagcacagtgggctaccatctttgcacgatttggc
gccaaactggacaacgtcaacgtcggttgttgcggaatggcgggaacgtatggacatgag
gcgaaaaaccacaaaaattcgttaggcatttatgaattatcgtggcaccaggcaatggaa
aaattaccgcgccaacgctgcctggcaacgggatattcctgccgcagtcaggttaaacgt
attgaagggacgggggttcgtcacccgttacaggcactactggagttgatgaaatga
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