Escherichia fergusonii: EFER_1453
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Entry
EFER_1453 CDS
T00811
Symbol
yncC
Name
(GenBank) putative DNA-binding transcriptional regulator
KO
K13654
GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efe03000
]
EFER_1453 (yncC)
Transcription factors [BR:
efe03000
]
Prokaryotic type
Helix-turn-helix
GntR family
EFER_1453 (yncC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
DUF7744
HTH_24
RNA_pol_Rpb4
DUF6746
Motif
Other DBs
NCBI-ProteinID:
CAQ88973
UniProt:
B7LQT0
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Position
1494095..1494760
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AA seq
221 aa
AA seq
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MPGTEKIPHISLTMKVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVS
VNALSVAPAQAFTVPEVGKRQLDEINRIRYELELMAVALAVENLTPQDLAELQELLEKLQ
QAQEKGDMEKIINANRLFRLAVYHRSNMPILCEMIEQLWIRMGPGLHYLYEAINPAELRE
RIESYHELLAALKVKDKEGCKHCLAEIMQQNVAMLYQQYNR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaacggaaaaaataccgcatatcagtttaactatgaaggttgagaacgacctg
aaacatcagcttagtattggcgcactaaaacctggcgcacgcctgattactaaaaatctg
gcggagcaattaggtatgagtattacacccgtgcgtgaagcattattacgtctggtttcg
gtgaatgcgctctctgtcgcaccagcgcaagcatttacagtaccggaagtggggaaacgt
caattagacgaaatcaatcggatccgctacgaactggaattaatggcagttgctctggct
gttgaaaacctcaccccgcaagacctggcagaacttcaggaattgctcgagaaattacag
caggcgcaagaaaagggcgacatggaaaaaatcattaatgcgaacagactatttcgctta
gcggtttatcatcgctcaaatatgcccatcctgtgtgaaatgattgagcaactgtggatc
aggatggggcctggtttacattatctttatgaagcgattaacccagcggaattacgtgaa
cgtatagaaagctatcatgaactactcgccgcgttaaaagtaaaagacaaagagggatgc
aaacattgtcttgctgaaattatgcaacaaaacgttgctatgttataccagcaatataat
cgttaa
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