Escherichia fergusonii: EFER_1514
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Entry
EFER_1514 CDS
T00811
Symbol
ydcS
Name
(GenBank) putative spermidine/putrescine transporter subunit; periplasmic-binding component of ABC superfamily transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
efe
Escherichia fergusonii
Pathway
efe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EFER_1514 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
efe02000
]
EFER_1514 (ydcS)
Transporters [BR:
efe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
EFER_1514 (ydcS)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Glyco_hydro_62
Motif
Other DBs
NCBI-ProteinID:
CAQ89033
UniProt:
B7LR91
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All DBs
Position
1550064..1551209
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AA seq
381 aa
AA seq
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MSKTFARSSLCALTMTIMTAHAAEPPTNLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQF
EKETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKT
LDPRVVKGDWFNVSGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVAQNLPDGKSNKG
RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRDQHSLIHRYWHDTT
VQMSDFKNEGVVASSAWPYQANALKAEGQSVATVFPKEGVTGWADTTMLHSEAKHPVCAY
KWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAE
GGKFVPYSRWTQDYIAIMGGR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacatttgcccgcagcagcctgtgtgcgctcaccatgacaataatgaccgct
cacgccgccgaaccacctaccaatttagataaaccggaagggcgactggatattatcgcc
tggccgggatacatcgaacgcggacaaactgataaacaatacgactgggtaacgcaattc
gaaaaagagacaggttgcgcggtgaatgtaaaaaccgccgcgacgtccgatgaaatggtc
agtctgatgaccaaagggggttacgatctggttacggcatccggcgatgcctcgctgcgt
ttgattatgggtaaacgcgtgcagccgattaataccgcattgattcccaactggaagacg
ctagatccgcgtgtggttaaaggcgactggtttaacgttagtggcaaagtttatggcaca
ccttaccaatgggggccgaacctgctgatgtacaacactaaaaccttcccgaccccgccg
gatagctggcaagtggtttttgttgcgcagaatctgccggacggcaagagcaataaaggc
cgcgttcaggcttatgatggccctatttatattgcggacgctgcgttgttcgttaaagcc
actcagccgcagttgggcatcagcgatccgtatcaactcaccgaagaacagtaccaggcg
gtgctgaaagtgctgcgcgatcaacatagtttgatccatcgctactggcatgacactacc
gtgcaaatgagtgatttcaaaaacgagggtgtggttgcttccagtgcatggccttatcag
gccaacgccttgaaagccgaggggcagtctgtcgctaccgtattcccgaaggagggcgtt
accggttgggctgataccaccatgctacatagcgaagcgaaacatccggtttgcgcctac
aaatggatgaactggtcattaacgccaaaagtgcagggcgatgtggcggcctggtttggc
tcgttaccggtagtgccggaagggtgtaaagccagtccgttattaggcgaaaaaggttgt
gaaacaaacggttttaactatttcgataaaatcgccttctggaaaacgcctatagcagaa
gggggcaagtttgttccctacagtcgctggacgcaggattacattgccattatgggcggt
cgctaa
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