Escherichia fergusonii: EFER_1562
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Entry
EFER_1562 CDS
T00811
Symbol
lsrD
Name
(GenBank) AI2 transporter; membrane component of ABC superfamily
KO
K10557
AI-2 transport system permease protein
Organism
efe
Escherichia fergusonii
Pathway
efe02010
ABC transporters
efe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EFER_1562 (lsrD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EFER_1562 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
efe02000
]
EFER_1562 (lsrD)
Transporters [BR:
efe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
EFER_1562 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
PspB
Motif
Other DBs
NCBI-ProteinID:
CAQ89081
UniProt:
B7LRD9
LinkDB
All DBs
Position
complement(1593367..1594359)
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AA seq
330 aa
AA seq
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MRIRYGWELALAALLVIEIVAFGAVNPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGG
IDISFGSTIGLCAIALGVLFQGGVPMPLAIILTLLLGALCGLINAGLIIYTKVNPLVITL
GTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLIVFWLW
LHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDL
GASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGAL
LIVVVVGRSVSLHRQQIKEWLARRANNTLP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcgctacggttgggaactggcccttgccgcattactcgttattgagattgtc
gcatttggcgcagtaaatccgcgaatgttagatctcaatatgctgttgtttagcaccagt
gattttatctgtattggcattgtcgccctaccgctgacgatggtgattgtcagtggcggg
atcgatatttcgtttggttcgactatcggcctgtgcgccatcgcattgggtgtgttgttt
caaggcggcgtgccaatgccgctggcgattatcctgacgttactgctcggcgcattgtgc
ggtctgattaacgccggattaattatctataccaaagttaacccgctggtgattacgctt
ggcacgctgtatctgtttgctggaagcgccctgctgctttccgggatggctggggctacg
gggtacgaaggtattggtggattcccgatggcgtttacagatttcgctaatctggatgtg
ctggggcttcccgttccgctgattatctttctgatatgtctcatcgttttctggctgtgg
ctgcataaaacccatgccggacgtaatgtgtttttgattggacaaagcccgcgcgtggcg
ctttatagcgcgattccggttaaccgcaccttatgtgcactctatgccatgacggggctg
gcgtctgcggtcgccgccgtgctgctggtttcgtattttggttctgcacgctccgatctc
ggtgcgtcgtttttgatgcccgccatcaccgccgtggtgcttggtggtgccaatatttat
ggtggttccggttcgattatcggcactgccattgcggttttattagtgggatatttgcaa
caaggtttgcaaatggcaggagtgccaaatcaggtgtccagcgccctttccggcgcgctg
cttatcgtcgttgtcgtaggtcgttccgttagcctgcatcgccagcaaattaaagagtgg
ctggcgcgccgggccaataacacattgccataa
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