Escherichia fergusonii: EFER_1795
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Entry
EFER_1795 CDS
T00811
Symbol
ymfC
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
efe03009
]
EFER_1795 (ymfC)
Enzymes [BR:
efe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
EFER_1795 (ymfC)
Ribosome biogenesis [BR:
efe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EFER_1795 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Cyc-maltodext_C
Motif
Other DBs
NCBI-ProteinID:
CAQ89310
UniProt:
B7LSM4
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All DBs
Position
1850390..1851043
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AA seq
217 aa
AA seq
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MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGR
KTLKEFIPIQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTED
ALEALRNGVTLNDGPTLPAGAEMVEEPEWLWPRNPPIRERKSIPTSWLKITLYEGRNRQV
RRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWRDVTD
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaattcataatctctgaaaataccatgcaaaaaacttcttttagaaatcaccag
gttaagcgattcagctcgcaacgttctaccaggcgaaaacctgaaaaccagcccacgcgt
gtgatcctgttcaataaaccctacgatgttcttccgcagttcaccgatgaagccggacgc
aaaacattaaaagaattcatcccgattcagggggtgtatgcggcaggtcgtctcgaccgc
gacagcgaagggttactggtgctgaccaataacggcgctttgcaggcgcgtttaacccag
ccgggtaaacgtaccgggaaaatctattatgtacaggtagaaggtattcccacggaagac
gcccttgaagcgttgcgcaatggcgtaaccttaaatgatggccctaccctgcccgcaggt
gcggagatggttgaggagccggaatggttatggccccgtaatccgccaattcgtgaacga
aaaagtattcccaccagctggcttaagatcaccttatatgaaggacgtaatcgccaggtg
cgccgcatgaccgcccatgttggtttccccacgctgcgactgattcgctatgcgatgggt
gattactctttggataatcttgccaatggcgaatggcgagacgtgacagattaa
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