Escherichia fergusonii: EFER_1898
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Entry
EFER_1898 CDS
T00811
Symbol
lysU
Name
(GenBank) lysine tRNA synthetase, inducible
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
efe
Escherichia fergusonii
Pathway
efe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EFER_1898 (lysU)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
efe01007
]
EFER_1898 (lysU)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efe03016
]
EFER_1898 (lysU)
Enzymes [BR:
efe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
EFER_1898 (lysU)
Amino acid related enzymes [BR:
efe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
EFER_1898 (lysU)
Transfer RNA biogenesis [BR:
efe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
EFER_1898 (lysU)
Prokaryotic type
Other AARSs
EFER_1898 (lysU)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF2333
Motif
Other DBs
NCBI-ProteinID:
CAQ89407
UniProt:
B7LTA3
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All DBs
Position
complement(1940790..1942307)
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AA seq
505 aa
AA seq
DB search
MSEREAQGANEAIDLNDELRNRREKLAALRQQGVAFPNDFRRDSTSDQLHAEYDEKDNQE
LESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGD
IIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKS
RQTFVVRSKILAAIRKFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRT
LAQDVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDDFDAAKALAESIGI
TVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG
REIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGID
RMIMLFTNSHTIRDVILFPAMRPQK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacgagaagcacagggtgccaatgaggcaattgatcttaatgatgaactgaga
aatcgtcgcgaaaaactggcggcgctgcgtcaacaaggcgtagcttttccaaatgatttt
cgccgcgactctacctctgaccagctgcacgctgaatatgatgaaaaggataatcaggaa
cttgaatccttaaacattgaagtttcggttgctggtcgaatgatgacccgtcgcatcatg
gggaaagcttcctttgtaacgttgcaggatgtcggaggacgtattcaactgtatgttgcg
cgggatagcctgccagaaggtgtttataacgatcagtttaaaaaatgggatctgggggac
attatcggtgcccgcggtacgctgtttaagacgcaaaccggtgaactttccattcactgt
actgagttacgtctgctgactaaggcactgcgtccattgccggataaattccatggtctg
caagaccaggaagtacgttatcgccagcgttatctggatctgatcgcgaacgataaatca
cgccaaacttttgtcgtacgctcaaaaattctggcggctatccgcaaattcatggtcgcc
cgtgggtttatggaagtagaaaccccgatgatgcaggtcatcccgggtggggcatctgct
cgtccgtttattacccatcacaatgcccttgatttggatatgtacctgcgtattgcgccg
gagttgtatctgaaacgtctggttgttggtggttttgaacgggtattcgaaatcaaccgt
aacttccgtaatgaaggtatttctgttcgccataatccagagttcacgatgatggagctc
tacatggcgtatgcggattatcacgatttgattgagcttacggagtcgctgttccgtacc
ctggcacaggatgtactgggtaccactaaagtcacttatggtgagcatgtgtttgatttt
ggcaaaccgtttgaaaaactcaccatgcgcgaggcaattaaaaaatatcgcccggaaacc
gatatggccgacctggatgattttgatgccgctaaagcattagctgaatctatcggtatt
acggtagagaaaagctgggggctggggcgtatcgtcacggagatctttgacgaagtggca
gaagcacatctgattcagccaacctttattacggagtatccggcagaagtatcgccgctg
gcgcgccgtaatgatgttaacccggaaattaccgaccgttttgaattcttcatcggtggt
cgtgaaatcggtaatggttttagcgaattaaatgacgcagaagatcaggccgaacgtttc
caggaacaggttaatgctaaggccgcaggtgatgacgaagccatgttctacgacgaagat
tacgttactgcgctggaatatggtctgccgccaaccgcgggcctggggattggtatcgac
cgaatgattatgctgtttactaacagtcatactattcgcgacgttattcttttcccggca
atgcgcccacagaaataa
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