Escherichia fergusonii: EFER_2332
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Entry
EFER_2332 CDS
T00811
Symbol
uvrB
Name
(GenBank) excinulease of nucleotide excision repair, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
efe
Escherichia fergusonii
Pathway
efe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EFER_2332 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_2332 (uvrB)
DNA repair and recombination proteins [BR:
efe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EFER_2332 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EFER_2332 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
UB2H
IF2_N
DUF1844
PRDA1_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAQ89833
UniProt:
B7LJY3
LinkDB
All DBs
Position
complement(2389053..2391074)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPR
FTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttctggcgatcagcccgaggcg
attcgacgtctcgaagaggggctggaagatggtctggcgcaccagacgttacttggcgtg
acgggttccgggaaaaccttcaccattgccaatgtcattgctgaccttcagcgcccaacc
atggtacttgcgcccaacaaaacgctggcggcccaactgtacggcgaaatgaaagagttc
ttcccggaaaacgcggtggagtatttcgtctcctactacgactactatcagccggaagcc
tatgtaccgagttccgacaccttcattgagaaagatgcctcggtaaacgaacatatcgag
cagatgcgtttgtccgccaccaaagcgatgctggagcggcgtgatgtggttgtggtggcg
tcggtttccgcgatttatggtctgggcgatcctgatttatatctcaagatgatgctccat
cttacggtcggtatgattatcgatcagcgcgcgatcctgcgccgcctggcggagctgcaa
tacacccggaatgatcaagcattccagcgcggtactttccgcgttcgtggcgaggtgatt
gatatcttcccggcagaatcggatgacattgcacttcgcgtggaactgtttgacgaggaa
gtggaacgattgtcgttatttgatccgctaaccgggcagattgtttccaccattccacgt
tttaccatctacccgaaaacgcactacgttacgccgcgcgagcgcattgtgcaggcgatg
gaagaaattaaagaagaactggccgccagacgcaaagtgctgttggagaacaacaaactg
ctggaagagcagcggctgactcagcgtacccagtttgatctggagatgatgaacgaactg
ggatattgctcggggattgaaaactactcgcgcttcctctccggccgtggaccaggtgag
ccaccgccgacactgtttgattacctgcctgccgatgggctgttggtcgtcgatgaatct
cacgtcaccattccacaaattggcggcatgtatcgcggtgaccgggcgcgtaaagagaca
ctggtggagtacggcttccgcctgccatcggcgctggataaccgtccgctgaagtttgaa
gagttcgaagcattagcgccgcaaaccatctatgtttcggcgacgccgggtaattacgag
ctggaaaaatccggtggtgatgtggtggatcaggtcgtgcgtccaaccggattgcttgat
ccgattatcgaagtgcgaccggtggcaacacaggttgatgatcttctttcggagattcgc
cagcgagcggcaattaacgaacgcgtgctggtcacaacactgaccaagcgaatggcggaa
gatcttacggaatatctcgaagaacacggtgagcgtgtacgttatcttcactcagatatc
gataccgtcgagcgcatggaaatcatccgcgacttgcgtctgggtgagttcgacgtgctg
gtagggatcaacttactgcgcgaaggtctggatatgccggaagtttcgctggtggcgatc
ctcgacgccgacaaagaaggcttcctgcgttctgaacgttcgttgatccagaccattggt
cgtgcggcacgtaacgtcaatggtaaagcgattctctacggcgataagatcaccccgtca
atggcaaaagcaattggcgaaaccgaacgtcgccgcgagaaacagcagaagtacaacgag
gaacacggcattacgccgcaaggcttgaacaagaaagtggtcgatatcctggcgctgggg
cagaacattgctaaaaccaaagcgaagggcagaggaaaatcgcgaccgattgttgagccg
gataatgtgccgatggatatgtcgccgaaggcgttgcagcagaaaatccatgaactggaa
gggctgatgatgcaacacgcgcaaaatctggagttcgaagaagcggcgcaaattcgtgac
cagttgcatcagctgcgtgagctgttcattgcggcttcgtga
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