Escherichia fergusonii: EFER_2466
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Entry
EFER_2466 CDS
T00811
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
efe
Escherichia fergusonii
Pathway
efe03030
DNA replication
efe03430
Mismatch repair
efe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EFER_2466 (holA)
03430 Mismatch repair
EFER_2466 (holA)
03440 Homologous recombination
EFER_2466 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efe03032
]
EFER_2466 (holA)
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_2466 (holA)
Enzymes [BR:
efe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EFER_2466 (holA)
DNA replication proteins [BR:
efe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EFER_2466 (holA)
DNA repair and recombination proteins [BR:
efe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EFER_2466 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CAQ89963
UniProt:
B7LLH3
LinkDB
All DBs
Position
2530587..2531618
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AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRQVAAAHGFEEHHTFSIDPNTD
WYAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKA
QENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMGEALNRLSQAQLRQ
AVQLLTRTEITLKQDYGQSVWAELEGLSLLLCHKALADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcggttgtacccagaacaactccgcgcgcagctcaatgaagggctgcgcgcggcg
tatcttttacttggtaacgatcctctgttactgcaggaaagccaggacgctattcgtcag
gtcgctgcggcacacggattcgaagaacaccacactttttccattgatcccaacacagac
tggtatgcgatattttcgttatgccaggccatgagtctgtttgccagtcgacaaacgctt
ttgctgttgttaccagaaaacggaccgaatgcggcgatcaatgaacaacttctcacactc
accggacttctgcatgacgatctgctgttgatcgtccgcggtaataaattaagcaaagcg
caagaaaatgccgcctggtttactgctcttgctaatcgaagcgtgcaggtgacctgtcaa
acaccggagcaggctcagcttccccgctgggttgctgcgcgtgcaaaacagctcaactta
gaactggatgacgctgcaaatcaggtgctctgctactgttatgaaggtaacctgctggcg
ctggcccaggctctggagcgtttatcgctgctctggccggacggcaaactgaccttaccg
cgcgttgaacaggcggtgaatgatgccgcgcatttcaccccttttcattgggttgatgct
ttgttgatgggcaaaagtaagcgcgcgctgcatattcttcagcaactgcgtctggaaggt
agcgagccggttattttgttgcgcacattacaacgagaactgttgttactggttaacctg
aaacgccagtctgcccatacgccactgcgtgcgttgtttgataaacatcgcgtttggcag
aaccgccggggcatgatgggcgaggcgttaaatcgcctgagtcaggcacagttacgccag
gctgttcaattacttacacggacagaaattactctcaaacaagattatggtcagtcagta
tgggcagaacttgaaggactttctctgctgctttgtcataaagcgctggctgatgtattc
attgatggttaa
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