Escherichia fergusonii: EFER_2577
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Entry
EFER_2577 CDS
T00811
Symbol
hupB
Name
(GenBank) HU, DNA-binding transcriptional regulator, beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efe03032
]
EFER_2577 (hupB)
03036 Chromosome and associated proteins [BR:
efe03036
]
EFER_2577 (hupB)
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_2577 (hupB)
DNA replication proteins [BR:
efe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EFER_2577 (hupB)
Chromosome and associated proteins [BR:
efe03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EFER_2577 (hupB)
DNA repair and recombination proteins [BR:
efe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EFER_2577 (hupB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CAQ90072
UniProt:
B7LMD9
LinkDB
All DBs
Position
complement(2643798..2644070)
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AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPSFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgatcgacaagattgctgcaggggctgatatctctaaagcagct
gctggacgtgctttagacgcgattattgcttccgttactgagtctctgaaagaaggggat
gacgtagcgctggtaggttttggtacttttgctgttaaagagcgtgctgcccgtactggt
cgcaacccgcaaaccggtaaagagatcaccatcgctgctgctaaagtaccgagcttccgt
gcgggtaaagcactgaaagacgcggtaaactaa
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