Escherichia fergusonii: EFER_2629
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Entry
EFER_2629 CDS
T00811
Name
(GenBank) Exonuclease sbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_2629
DNA repair and recombination proteins [BR:
efe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EFER_2629
Archaeal homologous recombinant proteins
EFER_2629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
AAA_21
cobW
AAA_15
AAA_14
NTPase_1
AAA_22
GTP_EFTU
Seadorna_VP6
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CAQ90124
UniProt:
B7LMJ1
LinkDB
All DBs
Position
2699492..2702635
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTTEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQAPRVELARCA
DGKILADKVKDKLEMTASLTGLDYDRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEQHKTARTELEKLQAQVSGVSLLTPEQLQTLTESLQVLTDEEKQQVTAQQ
IQQKHLNWLIRQNELQQEASRRQQAQHQAEAEIEKAQPQLAALELAQPAMQLRPQWQRIQ
EHTAAVTRTRQQSEEVNTRLQQMLAQRAGIRRSAKKQMNAMLSTRQTLSDWLATNDAFRL
MSNELAGWRALFAQQTNDHSQQQKWQQQLTSDTRKLESLPVPTLNLSPDETNAALALYNQ
QRPLRQRLSTLHGQITPKQKRLAQLQASTQELHQQLTQRNVMLEEMRKRYKVKNQEFNDV
KTICEQEARIKSLEAQRALLQSGQPCPLCGSTTHPAVAAYQALEPGVNQTRLAELEKEVT
NLREEGATLRGQLEALQQQLQRDESEAQTLIKDERVLTQEWQTVVERLGIILQPHDDIQP
WLNAQEEHEKQLYLLNQRHELQLQIANHAQQVAQFQQQIAQRKASLAEDITRFSLTLPEA
GDEQSWLTARQQEAQEWQKRQTELTTLQAKIAELAPLLETLPESDITTTGEEVTEWQNWR
QIHDQCLSLQSQWQTLQQQLTQELQRAAEAQTAFESVLQSSVFADQAAFLAALLDEESYA
RLEQFKQSLEQHYQQVQTLSNQASQALVAHQQQRPADLEPQYSVEHIQQALAQLAYQLQE
NAKRQGEIRQQIKQDADNRQQQQTLMAQIDKATQQVEDWGCLNALIGSKEGDKFRKFAQG
LTLDNLVHLANRQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTQIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDNQFQVK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcgcctgaaaaacctgaactctctgaaaggcgaatggaagatt
gatttcaccacagaaccgtttgccagcaacggactgtttgccattaccggcccaacggga
gccggtaaaacgacattattagatgcaatttgcctggccctttatcacgaaactccacgc
ctttccaacgtttcacaatcacaaaatgacctgatgacccgcgatactgccgaatgtctg
gcggaagtggaatttgaagtaaaaggtgaagcgtaccgcgcgttctggagccagaatcgg
gcgcgtaaccagccagacggtaatttacaggcgccacgtgttgagctggcacgctgcgca
gatggcaagatcctcgccgacaaagtcaaagacaaactggagatgacagcgtcattgacc
gggctggattatgatcgatttacccgttcgatgctgctttcacaagggcagttcgctgcc
tttcttaatgcaaaaccgaaagaacgtgctgagttgctggaagagctgacaggtacggaa
atctacgggcaaatctctgccatggtatttgagcaacacaaaacggcgcgtacggaactg
gaaaagcttcaggcccaggtcagcggtgtctcattattaacgccagagcagttgcaaact
ttaaccgaaagtttgcaggtacttactgacgaagaaaaacaacaagttaccgcccaacaa
attcaacaaaagcatcttaactggctgatccgccaaaatgaactgcagcaggaggccagt
cgtcgtcagcaggcacaacaccaggccgaggcagaaatagaaaaagcacagcctcagttg
gcagcactggaactggcacaacctgccatgcagttgcgtccacagtggcaacgtattcag
gagcacactgctgcggtaacccgtactcgccagcaaagcgaagaagtaaacactcgctta
caacagatgctggcacaacgtgcagggatccgccgcagtgcgaaaaaacagatgaatgcg
atgctttctacacggcaaacgctaagtgactggctggcaacaaacgatgcctttcgcctg
atgagtaacgagctggcgggatggcgggcattgtttgctcaacaaaccaatgaccacagc
cagcagcaaaaatggcaacaacaactgacaagcgatacccggaagctggaaagtctgcca
gtgccgactctcaacctgagtcctgatgaaacgaatgcagctctcgcactgtataaccag
cagcgcccacttcgtcagcgactgagtactctacatgggcagattacgccaaagcaaaaa
cgactcgcgcagctacaggcctctacgcaggaattacaccagcaactaacccagcgtaac
gttatgctggaagagatgcgcaagcgttataaggtgaaaaatcaagaattcaatgatgta
aaaaccatctgcgaacaggaagcccggatcaaaagccttgaagcccagcgcgccttatta
caatcgggacaaccttgcccactttgcggttcaacaacacatccggctgttgctgcttat
caggcactggagccaggtgttaaccagactcgtctcgccgaactggaaaaagaagttact
aatctcagagaggaaggtgccactctgcgtgggcaactggaagcattgcagcaacaactt
cagcgagacgaaagcgaagcgcagacgctaattaaagatgagcgagtactcactcaagaa
tggcaaacagttgttgaacgtcttggcatcatcctacagcctcatgacgatattcagccg
tggctgaatgcccaggaagaacatgaaaagcagttatatttgctcaatcaacgccacgaa
ctgcaactacaaattgcgaatcatgcgcagcaagttgctcaatttcagcaacaaatcgca
cagcgtaaggcatcgttagcagaagacataacgcgtttttcactgacgttacctgaagca
ggtgatgagcaaagctggctgacggcacgccaacaggaagcccaggagtggcagaagcgg
cagactgagctcaccacattgcaggcaaaaatcgctgagcttgcgcctttactggaaacc
ttgccagaaagcgatattacgaccactggcgaagaggttactgagtggcaaaactggcgg
cagatccatgatcagtgtctttccttgcaaagtcagtggcaaacgctgcaacagcaactg
acgcaagagctgcaacgcgccgcagaagcacaaacagcgtttgagtcagtgttacagtcc
agcgtgtttgctgatcaagccgcgtttcttgccgccttgcttgatgaagaaagctacgcc
cgactagagcagttcaagcaatcgctggaacagcattatcagcaagtacaaacgctgtct
aatcaggcaagtcaggctctggtggcacatcaacagcagcgaccggcggatcttgagccg
caatattctgttgaacacattcagcaggcgctggcgcaactggcgtatcagttacaagaa
aacgccaaacgtcagggcgaaattcgccagcaaattaagcaggatgcggataaccgccaa
cagcagcaaacgctgatggcgcagattgacaaagccacgcagcaggtcgaagactggggc
tgtcttaatgcccttattggctctaaagaaggcgataaattccgtaaatttgctcaggga
ctgacgttggataacctcgtacatctggccaatcgccagttaacccgtctgcacggtcgt
tatctactgcaacgcaaggccagcgaggcactggaagttgaagtggtcgatacctggcag
gcagatgccgtacgcgatacccgcacgctctcagggggtgaaagcttcctcgtcagcctg
gcactggcgctggcgttatcggatttggtcagccataaaacgcaaattgattcacttttc
ctcgacgaagggtttggcacactggacagcgaaacactggataccgcactggatgcactg
gatgcgctaaatgccagtggcaaaacgattggcgtcattagccacgtcgaagcgatgaaa
gaacgtattccggtgcaaattaaagttaaaaagatcaacggacttggctacagcaaactg
gataatcagttccaggtgaaataa
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