Escherichia fergusonii: EFER_2752
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Entry
EFER_2752 CDS
T00811
Symbol
recD
Name
(GenBank) exonuclease V (RecBCD complex), alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
efe
Escherichia fergusonii
Pathway
efe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EFER_2752 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_2752 (recD)
Enzymes [BR:
efe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EFER_2752 (recD)
DNA repair and recombination proteins [BR:
efe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EFER_2752 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Helicase_RecD
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
MukB
nSTAND3
PhoH
AAA_28
CbiA
DEAD
Bcl-2
T2SSE
UvrD_C
SRP54
DUF6079
FtsK_SpoIIIE
TrwB_AAD_bind
NTPase_1
AAA
ATPase
Motif
Other DBs
NCBI-ProteinID:
CAQ90247
UniProt:
B7LNH4
LinkDB
All DBs
Position
complement(2810777..2812597)
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AA seq
606 aa
AA seq
DB search
MSLQELLLSAVEQKFLRPLDAQFALAVAGDNEPAVALAAAILSHDAGEGHVCLPLSRLVN
SDEPHPLLAMGFNKFDAPQDWQNCLLASEAVSQGERPTPMILHGDRLYLNRMWSSERTVA
RFFNDVNYAIEIDEPLLTQTLERLFPSTGEINWQKVAAAVALTRRISVISGGPGTGKTTT
VAKLLAALIQMMDGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKTRIPDDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIEALPPHARVIFLGDRDQ
LASVEAGAVLGDICAWVSAGFTAQRAQQLSRLTGCEIPAGKGTEAASLRDSLCLLQKSYR
FGSDSGIGQLAAAINRGDKTAVRSIFQQEFSDIEKRTLTSSEDYSAMLEEAIAGYGRYLQ
LLQQRAEPESIIQAFNDYQLLCALREGPFGVAGLNERLEHVLQQKRKIHRHPHSRWYEGR
PVMIARNDSPLGLFNGDIGIALDRGQGMRVWFAMPDGSIKSVQPSRLPEHETTWAMTVHK
SQGSEFNHAALILPTQRTPVVTRELVYTAVTRARTRLSLYTDERILSSAIATRTERRSGL
PALFRV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagccttcaagaattattgctgagcgccgttgagcaaaaatttttgcgtccgttggat
gcgcaatttgccctggcggtggccggagataacgagccagctgttgcgctggcggcggcc
atcctcagccatgatgcaggtgaagggcatgtttgcctgcccctttctcgccttgttaac
agtgatgagccacatccactactggcaatgggcttcaacaaatttgacgcgccgcaagac
tggcaaaactgcctgttggcgtcagaagcagtaagccagggcgaacgacccacaccgatg
attctgcatggtgatcgcctctacctgaatcgcatgtggagcagtgaacgtacggtggca
cgcttttttaatgacgtaaattacgccattgaaattgatgagccactactgacacaaacg
ctggagcgactcttcccttccacaggtgaaatcaactggcaaaaagtggccgctgcggtg
gcattaacgcggcgaatttcggttatctctggtggtccgggaacgggaaaaaccacaaca
gttgcaaaattgctggcggcactgattcagatgatggatggcgaacgctgccggatccgc
ctggctgcgccgacaggtaaagctgctgcgaggttgactgaatctttgggtaaagcactg
cgccaactcccgctaaccgacgagcaaaagacgcgtattcctgatgatgccagcacgttg
caccgcttgttgggtgcgcaaccgggaagccagcgtttgcgtcatcatgcgggaaacccg
ttgcatcttgacgtactggtagtggatgaagcgtcaatgatcgatctaccgatgatgtcg
cggttgatcgaggctttacctcctcatgccagggtgatctttctgggtgatcgcgatcaa
ctggcttctgtagaagcaggggccgtattgggtgatatctgcgcctgggtcagtgctggt
tttaccgcacagcgcgcacagcaattatctcgcctgacgggatgtgaaatacccgcaggc
aaggggaccgaagcggcatctttacgagacagtctctgcctgctgcaaaaaagttaccgt
tttggcagcgattccgggattggacaactggctgcggcgattaatcgcggagacaaaaca
gccgttcgttcaatatttcaacaggaatttagcgatatcgaaaaacgcacgctcaccagt
agcgaagattacagcgcgatgctggaagaggcgattgctggctatggtcggtatctgcaa
ctactgcaacaacgtgctgagccggaatcaatcattcaggcattcaatgattaccagtta
ctttgcgcattacgggaaggaccatttggcgttgccgggctaaatgaacgactggaacac
gtgttacagcaaaaacgtaaaattcatcgccaccctcattcccgttggtacgaagggaga
ccggtaatgattgcccgcaacgacagtccattaggattgtttaatggtgatatcggcata
gcgcttgatcgcgggcaggggatgcgagtctggtttgcaatgccagacggaagcattaaa
tcggtacagcccagccgtttgccggaacacgaaaccacctgggcgatgacggtacataag
tcgcaggggtctgagtttaatcatgcagcgctgattttgcccactcagcgtacgcctgtt
gtgacaagggaactggtttacaccgcagtaacccgcgcccgtacacgcctttcgctgtat
acagatgaacgcattttaagtagtgcaattgctacccgtacagagcgtcgtagcggactt
ccggcattgttcagagtttaa
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integrated database retrieval system
