Escherichia fergusonii: EFER_2805
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Entry
EFER_2805 CDS
T00811
Name
(GenBank) putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
efe
Escherichia fergusonii
Pathway
efe03420
Nucleotide excision repair
efe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EFER_2805
03430 Mismatch repair
EFER_2805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_2805
Enzymes [BR:
efe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFER_2805
DNA repair and recombination proteins [BR:
efe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EFER_2805
MMR (mismatch excision repair)
Other MMR factors
EFER_2805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CAQ90299
UniProt:
B7LP83
LinkDB
All DBs
Position
2870259..2872043
Genome browser
AA seq
594 aa
AA seq
DB search
MPRWRGIKMTHFNSQQMDYIESSIASSIYLEACPGSGKTEVIAAKVAKEINNWTLSPSGI
ALLSFSNSATDELFSRVKKYSPDTVSRFPHFIGTFDSFIFKFLIGPNAKCLTHFEGECNK
NTLRIIESASPLFIQTKYAYNKRGKIKAHHYTFDRRNDSILFNSDSPELDRMRNAINLQE
WQIKDLIETKYKLFKSGLMTHDDSLFLAAEIFINEKYKNYALLLSKRFPLIIIDECQDLS
YEHLFILQGLHDLGVKLHFVGDLEQSIYGFRAVDPKDTIKFITDNEFERMPLKINYRSCQ
QIIDLCSKLTAHDGVNGQFSSIESPCIVLQYNETPLELIDKIGQLCFGYSNNVIVARGHS
ILEKFTFNGVEDNIVKNLVNAINIFSLHGTQNIKNSLQLFSTVIRARSNHPIRESKYNCP
NEIESSVQWRAFLFYTLEYFIENKLNNFELTWSKWCKNANAILINLHQQPFITDELKPIV
EEVFSLSIKAPSGLAKINVSEFTAIEKVNTENYKYATIHSVKGETHDVTILLSSPSNSGN
NGSHWKQWISNQKSESTRFAYVASSRPRYRLVWGVKKLKNSEADTLRKLGFTIE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccaagatggagaggtataaagatgacgcattttaactctcaacagatggattatatc
gaatcctctattgcctctagtatttatcttgaggcgtgtcctggtagtggaaaaactgaa
gtcattgcagctaaagttgcaaaggagataaataattggacacttagtcctagtggtata
gctttattatccttttctaatagcgctacagatgaacttttctcacgggttaaaaagtac
tcccccgatacggtcagtagattcccacacttcattggaacttttgatagttttatattt
aagtttttaattggtcctaacgcaaaatgtttgactcattttgaaggggaatgtaataaa
aatactttaaggattatagagtctgcgtcaccattattcattcaaacaaaatatgcttac
aataaaagagggaagatcaaagcacaccattatacttttgatagaagaaatgattccata
ctgttcaactcggatagccccgaacttgacagaatgagaaacgccataaacctgcaggaa
tggcaaattaaagatttaatagaaacaaaatataagttatttaaatctggattaatgact
cacgatgactcactatttcttgctgctgaaatcttcattaatgaaaagtataaaaattat
gctttattactctctaaaagatttccactaattattattgatgagtgccaagatttatca
tacgagcacttatttatattacaggggcttcatgatttaggagttaaacttcactttgtc
ggtgatttagaacaatccatttatggtttccgtgctgtagatcctaaagatacaataaaa
ttcattactgacaatgaattcgaaagaatgccattaaaaattaattatcggagctgtcag
caaatcattgatctttgttcaaaattaacagcacatgatggtgttaatggccaatttagt
tcaattgaatctccctgtatcgttttgcagtataatgaaacgcctctagaattaatcgat
aaaattggacagctatgtttcggatacagtaataatgtaatcgtagctcgtgggcactct
attttggaaaagttcacatttaatggtgttgaagataatattgtgaaaaaccttgttaat
gcaataaatattttctcattacatggaactcaaaatataaaaaactcactgcagttattt
tcaacagtgatacgcgcgagatcaaatcatccaattagagaatctaagtataattgtcct
aatgagattgagtcatccgtgcaatggcgagcatttcttttctatacattggaatacttc
atcgagaataagctcaacaattttgaattaacatggagtaagtggtgtaaaaatgcaaat
gcaatccttatcaatcttcatcagcaaccgttcataactgatgaattaaaacctatagta
gaggaagtattttccttatctataaaagctccttcaggacttgcaaaaattaatgtttcg
gagttcactgcaatagaaaaagtaaatactgaaaattataaatatgctacaattcatagc
gttaaaggtgaaactcatgatgtaacaattctattatcatcgccttcaaactccggaaat
aatggttcacactggaaacagtggataagtaatcaaaaatcagaatcaaccagatttgcc
tatgttgcaagctcaaggcctagatatcgattagtctggggtgtcaaaaaattaaaaaat
agtgaagctgatacattaagaaaacttggttttactattgaatga
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