Escherichia fergusonii: EFER_2911
Help
Entry
EFER_2911 CDS
T00811
Symbol
yghJ
Name
(GenBank) inner membrane lipoprotein
KO
K10939
accessory colonization factor AcfD
Organism
efe
Escherichia fergusonii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
DUF7029
Motif
Other DBs
NCBI-ProteinID:
CAQ90404
UniProt:
B7LPT9
LinkDB
All DBs
Position
2975950..2980521
Genome browser
AA seq
1523 aa
AA seq
DB search
MRYDSVNLIYSLALLMSKKFKYKKSLLAAILSATLLTGCDGGGSGSSSANPPGDSGSGSI
PDVNPNPTPDPEPTPTPDPDPEPTPDPEPEPTPTKTGYLTLGGSQRVSGAFCNNAPSVGF
TFTPGDTVTCVIGGTTIATFDTLAETARSRSDVEKVAFSLEDAQELASSENKKNNALALV
TSSNSCPSDDEQVCLNFTSVVDRARFEKLYKQIDLAKEDFQKLVNEEVENNAATDKAPST
HTSPVVPATTPGTTPDLNAKFVSANAEQFYQYQPTEIILSEGRLVDSLGNGVVGVNYYTS
SGRGVTGENGKFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRY
SQAGENNDREIPDVVRKVFAEYPNVINEIINLSLSNGATLNEGDQTVELPNEFLAQLKSG
QAKEIDTAICNTTGSCNSPRWFSLTARNINEGQIQGVINKLWGVDEDYKSVSKFHVFHDS
TNFYGSTGNARGQAVINISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVR
PENVTRETATFNLPFISLGQVGDGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNS
DPDDMKNFMENMLRYLSNDRWLPDAKSNMTVGTNLDTVYFKKHGQVLGNSAPFAFHKDFA
GITVKPMTSYGNLNPDEVPLLILNGFEYVTHWGSDPYSIPLRADSSKPKLTQQDVTDLIA
YMNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRS
TPIWVYERYPAVDGKPPYTIDDTTKEVIWKYQQENKPDDKPKLEVASWQEEVEGKQVTQF
AFIDEADHKTPESLAAAKQRILDAFPGLEECKDSDYHYEVNCLEYRPGTDVPVTGGMFVP
RYTQLNLDADTAKAMLQAADLGTNIQRLYQHELYFRTNGRQGERLNSVDLERLYQNMSVW
LWNETKYRYEEGKEDELGFKTFTEFLNCYTNNAYVGTQCSAELKKSLIDNKMIYGEESSK
VGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGVVDTNGETVTQNINLYSDPT
KWFAGNMQSTGLWAPAQQEVSIESKATVPVTVTVALADDLTGREKHEVSLNRPPRVTKTY
DLKANDKVTFKVPYGGLIYIKGDSKEVQSADFTFTGVVKAPFYKDGKWQHDLNSPAPLGE
LESASFVYTTPKKNLNASNYTGGLEQFAKDLDTFASSMNDFYGRDSESGNHRMFTYKALT
GHKHRFANDVQISIGDAHSGYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTV
PGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNNQAWARGGAGDRLLMYAQL
KEWAEKNFDIKKWYPDGNLPAFYSDREGMKGWNLFQLMHRKARGDEVGDKTFGGKNYCAE
SNGNAADTLMLCASWVAQTDLSAFFKKWNPGANAYQLPGATEMSFEGGVSQSAYNTLASL
KLPKPEQGPETINKVTEYSMPAE
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttacgattccgtcaacttaatttattcacttgcgttattaatgagtaagaaattt
aaatataagaaatcgcttttagcggctattttgagtgcaacgttattaacgggctgtgac
ggtggtggctcaggctcttcttctgccaatccacctggagattctggctctggttccatc
ccggatgttaatccaaatccaacaccagatccggaaccgacgccgacacctgatccagac
ccggaacccactccagacccggagcctgaaccaacgcccactaaaaccggttatctgacc
ctggggggaagccaacgggtaagtggcgctttctgtaataacgcacccagtgttggcttc
acctttacgcccggcgatacggttacctgcgtaatcggcggtacgactatcgccacattt
gacactctggcggaaacggcacgcagccgcagtgatgtagagaaagtggcgtttagcctc
gaggatgcgcaggagctggccagctctgagaataagaaaaacaatgcgctcgccctggtg
acttccagcaacagctgcccgtcagatgatgaacaggtctgtctgaacttcacatctgtg
gttgatcgcgcacgctttgaaaaactgtataagcagattgatctggcaaaggaagatttc
caaaagctggtgaatgaagaggtggaaaacaatgccgccactgataaagcaccatcgact
catacgtcaccggttgtgcctgccactacaccgggtacaacgccggatctgaatgctaaa
ttcgtatcggcaaatgccgaacagttttatcagtatcaacctactgaaattattctctcc
gaaggccgtctggtggatagcctgggcaatggtgttgttggcgtaaattactacaccagc
tcaggccgtggcgtaactggcgaaaatggcaaattctcctttagctggggcgaaaccatc
tcctttggcatcgacacatttgagctgggatcggtacgcggtaataaatcgaccattgca
ttgactgagctgggtgacgaagttcgtggagcgaatatcgatcagcttattcatcgttac
tcccaggctggagaaaataacgatcgtgagatcccggatgtggtccgcaaggtctttgcc
gagtatcccaacgtgatcaacgagattatcaatctctcgttatccaatggcgcgacgctg
aacgaaggcgatcaaaccgttgagctgccaaacgaatttcttgcacagcttaaatccggg
caagcaaaagagatcgataccgcgatttgcaacacaaccgggagctgtaactctccacgc
tggttctcactgacagcgcgcaacattaatgaaggtcaaattcagggcgttatcaacaag
ttgtggggagtggacgaggattacaaatccgtgtcgaaattccacgttttccatgactcc
accaacttctatggcagtacgggtaacgcccgtggtcaggcggtgattaatatctctaac
gcggccttcccgattctgatggcgcgtaatgataaaaactactggctggccttcggcgag
aaacgtgcctgggataaaaatgagctggcgtacattactgaggcgccttccattgtgcga
ccagagaacgtgacacgcgaaaccgccaccttcaacctgccgtttatctcgctggggcaa
gtgggcgatggcaagctgatggttatcggtaacccacactacaacagcatcctgcgttgc
ccgaacggttacagctggaacgggggcgttaataaagacgggcagtgtacgctcaacagc
gacccggatgacatgaagaacttcatggagaacatgctgcgctatctgtcaaatgatcgc
tggttgccggatgcaaaatccaatatgaccgtgggtactaacctggatacggtgtatttc
aaaaaacatggccaggtgctgggaaatagcgcaccgtttgcgttccataaggatttcgct
ggcatcacggtcaaaccgatgaccagctatggcaatctgaatccagatgaagttcctctg
ttgatcctcaatggctttgaatacgtcacacattggggtagcgatccttactccattcct
ctgcgagcagatagcagtaaaccgaagctgactcagcaggatgtgaccgatctgatcgcc
tatatgaacaaaggtggatcggtgctgatcatggaaaacgtgatgagcaatcttaaggaa
gagagcgcatctggctttgtacgtctgcttgatgctgcaggtttgtcgatggcgcttaac
aagtcggtagtaaataacgatccgcaaggctacccggaccgtgttcgtcaacgacgttca
acgccaatttgggtctatgagcgttatccggctgtcgatggtaaaccaccgtataccatt
gatgacaccacgaaagaagttatctggaaatatcagcaagaaaacaaacctgatgacaaa
ccgaagctggaagttgccagctggcaggaagaagttgagggtaaacaggtaacccaattc
gcctttatagatgaagccgaccacaaaacgcctgagtcactggctgcggcaaagcagaga
attctggacgcgttccctgggctggaagagtgtaaggattctgactaccactatgaggtc
aactgtctggaataccgtccaggcacggatgtgccggtaaccggtggcatgtttgttcca
cgctatacgcaacttaatcttgacgccgacaccgcgaaagcgatgctgcaggctgcggat
ttaggcaccaacatccagcgtctgtatcaacatgagctttatttccgtaccaatggccgc
cagggtgagcgtctcaacagcgttgatctggaacgtttataccaaaacatgtccgtctgg
ctgtggaacgagacgaaataccgttatgaagagggtaaagaagacgagctgggctttaaa
acgttcactgagtttctgaactgctacaccaacaatgcatacgttggtacgcagtgttct
gctgagctgaaaaaatcgctgattgataacaagatgatttacggtgaagaaagcagcaaa
gtgggaatgatgaacccgagctacccgctcaactatatggaaaaaccgctgacacgcctg
atgctgggccgttcctggtgggatctgaacatcaaagttgatgttgagaagtatccggga
gtggtggatacaaacggcgaaaccgtcacacaaaacattaacttgtactcagatccaacc
aaatggtttgcaggtaacatgcagtcaactggcctgtgggcacctgcccagcaggaagtc
agcattgagtcaaaggcgacagttcctgtgaccgtgactgttgcgctggccgacgacctg
acaggacgagagaagcatgaagttagcctgaaccgtccgcccagagtgacgaaaacctat
gatctgaaagccaatgataaggtgacgttcaaagtcccttacggcggtctgatttacatc
aaaggcgacagcaaagaggtgcaatcagctgacttcacctttaccggtgtagtaaaagcg
ccgttctataaagacggtaagtggcaacacgatctgaactcccctgccccgctgggcgaa
ctggagtctgcgtcgtttgtctataccacaccgaagaagaacctgaatgccagcaattac
acgggcggactggagcaattcgctaaagatctggatacctttgccagctcgatgaatgac
ttctacggtcgtgatagcgaaagcggtaaccaccggatgtttacctataaagcattgacg
gggcataaacatcgtttcgccaacgatgtgcagatctccattggtgacgcgcactcgggt
tatccggtgatgaacagcagtttctcgccgaacagcaccacgctgccgacgacgccgctg
aacgactggctgatctggcacgaagtggggcacaacgccgccgaaacgccgctgactgtt
ccaggcgcgaccgaagtggcgaacaatgtgctggcgctgtacatgcaggatcgttatctc
ggcaagatgaaccgtgtcgctgacgatattaccgtcgcaccggaatatctggaggagagc
aacaaccaggcatgggcgcgcggcggtgcgggtgaccgtctgctgatgtacgcacaactg
aaggaatgggcagagaagaactttgatatcaagaagtggtatccagatggcaatctgcca
gcgttctacagcgatcgtgaagggatgaaaggctggaacctgttccagttgatgcatcgt
aaagcacgcggcgatgaggttggcgacaaaacctttggcggcaagaattactgtgctgaa
tccaacggtaacgcagcggacacgctgatgctgtgtgcctcctgggtcgcccagacggac
ctttccgcattctttaagaaatggaatccgggtgcgaatgcttaccagttgccgggagcg
acggagatgagcttcgaaggcggtgtgagccagtcggcttacaacacgctggcgtcgctc
aagctgccgaaaccggaacaggggccggaaaccattaacaaggttaccgagtattcgatg
cctgctgaataa
DBGET
integrated database retrieval system
