Escherichia fergusonii: EFER_3113
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Entry
EFER_3113 CDS
T00811
Symbol
yjgR
Name
(GenBank) putative ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_3113 (yjgR)
DNA repair and recombination proteins [BR:
efe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
EFER_3113 (yjgR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
TrwB_AAD_bind
ResIII
FtsK_SpoIIIE
SLFN-g3_helicase
AAA_16
AAA
T2SSE
AAA_30
AAA_7
AAA_25
CbiA
nSTAND_NTPase5
Hydrolase
AAA_19
AAA_18
SRP54
AAA_28
NTPase_1
nSTAND3
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
CAQ90606
UniProt:
B7LR03
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All DBs
Position
3203258..3204760
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AA seq
500 aa
AA seq
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MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK
GDLTGVAEEGTSSEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATLSDLGPLLL
ARLLNLNDVQSGVLDIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV
GAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLL
WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV
SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGE
ALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEM
LQKGVQASTEQQNNPPTKGKEVAVDDGILGGLKDILFGSTGPRGGKRDGVVQTMAKSAAR
QVTNQIVRGMLGSLLGGRRR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccctgttaattgcccgtacgccggacacagaactgtttttactgccggga
atggctaaccgtcacgggctgattactggcgcaacggggacgggtaaaaccgttacgctg
caaaaactggcagagtcattgtcggaaatcggtgttccggtgtttatggccgatgtgaaa
ggtgatttaacgggagtagcggaggaaggtacatcttcggaaaaactgctcgcaaggctt
aaaaatatcggcgtcaatgactggcaaccacatgctaatccggtggtggtgtgggatatc
tttggtgagaaaggccatccggtgcgggcgacgctttcagacctggggccgctgttgctg
gcgcgactgttgaatctcaacgatgtgcaatctggcgtgctggatatcatcttccgcatt
gctgatgatcaggggctgttactgctcgactttaaagatttgcgggcgattacccagtac
atcggcgataacgccaaatccttccagaatcagtacggtaatatcagtagcgcatcggtt
ggtgccatccagcgcgggctgttgtcgctggaacaacaaggcgcagcacacttttttggc
gagccgatgttggatatcaaagactggatgcgcaccgatgccaacggtaaaggcgttatt
aatatcctcagcgccgaaaagctttatcagatgccgaaactgtatgcagccagcctgctg
tggatgctttcagagttgtatgaacaattgccggaagcgggcgatctggagaaaccaaaa
ctggtgtttttcttcgacgaagcacatctgctgtttaacgatgcgccacaggtactgctg
gataagattgagcaggtgataaggcttattcgctcaaaaggcgtgggcgtctggttcgtt
tcgcaaaacccgtcggatatcccggataatgtgctcggccagctaggtaatcgcgttcaa
catgctttgcgggcttttacgcccaaagatcagaaagcggtaaaagctgcggcgcaaacc
atgcgggccaatccggcgtttgataccgaaaaggcgattcaggaactggggaccggcgag
gcgttaatctcgtttctcgatgcgaaaggaagtccttcagtggtggaacgggcgatggtg
attgccccctgttcacgaatggggccagtgacggaagatgagcgtaatggcctgattaat
cactccccggtgtatggcaaatatgaagatgaggtggaccgcgagtccgcctatgagatg
ctgcaaaaaggtgtgcaggccagtaccgagcagcaaaataatccccccacgaaagggaaa
gaggtcgcggtggatgacggcattcttggtggattgaaggatattttgtttggcagcacc
gggccgcgcggcggtaaacgcgacggcgtggtacaaacaatggcgaaaagcgccgcccgc
caggtgacgaatcagattgtgcgtgggatgttggggagtttgctgggggggagaaggcgg
taa
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