Escherichia fergusonii: EFER_3138
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Entry
EFER_3138 CDS
T00811
Name
(GenBank) Malonate utilization transacting regulator MdcR
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efe03000
]
EFER_3138
Transcription factors [BR:
efe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EFER_3138
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Sigma70_r4_2
HTH_30
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CAQ90631
UniProt:
B7LR28
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Position
complement(3223287..3224228)
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AA seq
313 aa
AA seq
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MLNNEITLRKIEIFLSYMESMNISKTAEAMNISAVSVHRALHSLEDNLRCSLFTHNGRNL
HPLPGAWVMKEQAREVINSFERCIYLTREAAGYHSPTLRLGLLYSLVMKTAPQIVQGLKN
RRPELTIEFIMNSNKKLLEALNEGKVDAVLVSTPDEYNTQLFETWTIFSDSIFLAVPVTD
VDLLESPVDLCQLQNKKFIALSEGFATWRGFQEAFKIAGFEPEITVRVHDIFSLMSMVNA
GVGYSLIPGRMRDLFTSGIRLLPLQIPYRMEQEISLVFPRSQETHPSILSLLAECRMYAR
QLTMEKTDVNSAP
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataatgaaatcacactgagaaaaatagaaatttttctctcatatatggagtcg
atgaatatatcaaaaacagcagaggcgatgaatatctctgccgtaagtgttcatcgtgct
ttgcattctctggaagataatttacgctgctctttatttacgcataatggacggaacttg
catcctctgccaggtgcatgggtaatgaaagagcaggcgcgggaagtaataaatagtttt
gaacggtgtatttatctgaccagagaagccgccggatatcattcaccaacacttcgtctg
ggattactttactcattagtaatgaaaacagcaccacaaattgtgcaaggattaaaaaac
cgacgtcctgaattaactatagagttcattatgaattcgaataaaaaactacttgaggct
ttaaatgaagggaaggttgatgctgttttagtctccacccccgacgagtacaatactcaa
ttattcgaaacatggaccattttctctgattcaatcttccttgctgttcctgtgactgat
gttgatcttttggagtcaccggttgatttatgccagttacagaacaaaaaatttatcgcc
cttagtgaagggtttgccacctggcgaggatttcaggaagcatttaaaattgccggtttc
gagccagaaattaccgtccgtgtgcatgacatattttcacttatgagtatggtaaatgca
ggggttgggtactcattaattccaggtagaatgagagacctttttaccagtggtattcgg
ctcttaccattacagataccttatcgtatggagcaagaaatatcattggtatttcctcgt
agccaggaaacacatccaagtattctatccttattagcagagtgtcgaatgtatgctcgc
caacttacgatggagaaaaccgatgtaaactcagccccataa
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