Escherichia fergusonii: EFER_3145
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Entry
EFER_3145 CDS
T00811
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efe03016
]
EFER_3145 (truB)
Enzymes [BR:
efe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EFER_3145 (truB)
Transfer RNA biogenesis [BR:
efe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EFER_3145 (truB)
Prokaryotic type
EFER_3145 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CAQ90638
UniProt:
B7LR35
LinkDB
All DBs
Position
complement(3231587..3232531)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLSVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattaacggcgttttgttgctggataaaccg
cagggtatgtccagcaacgatgcactgcaaaaagtgaaacggatttataacgctaatcgt
gccgggcataccggtgcgctggacccgctggcgaccggcatgttgccgatttgcctcgga
gaagcgacgaagttttcccagtatctgctggactccgacaaacgctatcgggtgattgcg
cgtcttggacagcgtactgatacttctgacgctgacggacaaatcgttgaagaacgtccg
gtaacctttagtgcagagcaactggcggcggcactggatactttccgtggtgatatcgaa
cagatcccttcgatgtattcagcactgaaataccagggcaaaaaactgtacgaatatgcg
cgtcagggaattgaagtcccgcgtgaagcacgcccgattaccgtttatgaattgttgttt
attcgccacgaaggcaatgaactggagctggaaattcactgctcaaaaggcacctatatc
cgcactatcattgacgatctcggcgaaaaactcggctgtggcgcgcatgttatttacctg
cgtcgcctgtctgtaagtaaatatccggttgaacggatggtgactctggaacatctgcgt
gaactggttgagcaagccgagcagcaggatattccggcagcggagttacttgatccatta
ctgatgccaatggacagtccagcttcggactatccggtggtgaatcttccgttaacgtct
tctgtttacttcaaaaatggtaacccggttcgtacatccggtgcgccgctggaaggactg
gttcgcgttacagaaggtgagaatggcaagtttatcggtatgggcgaaattgacgatgaa
ggccgcgttgcgcctcgtcgcctggtggttgaatacccggcgtaa
DBGET
integrated database retrieval system
