Escherichia fergusonii: EFER_3179
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Entry
EFER_3179 CDS
T00811
Symbol
rpoN
Name
(GenBank) RNA polymerase, sigma 54 (sigma N) factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
efe
Escherichia fergusonii
Pathway
efe02020
Two-component system
efe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EFER_3179 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EFER_3179 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efe03021
]
EFER_3179 (rpoN)
Transcription machinery [BR:
efe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EFER_3179 (rpoN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
CAQ90672
UniProt:
B7LR69
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All DBs
Position
3264141..3265574
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AA seq
477 aa
AA seq
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MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHEEVDTQQ
PQDSEALDTADALEQKEMPEELPLDASWDEIYTAGTPSGTSGDYIDDELPVYQGETTQTL
QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVSLEDILESMGDEEIDIEEIEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLDEARLIISDHLDLLANHDFRSLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQIN
QQYAAMCNGARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAEAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLATMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgcctcagttacaa
caggcgattcgtctgttgcaattgtcgacgctggaactccagcaagaacttcagcaggcg
ctggaaagtaaccccctgctcgagcaaaccgaccttcacgaagaagttgatactcagcag
ccccaggatagcgaagcactggacaccgctgacgcactcgaacaaaaagagatgccagag
gagctgccactcgacgccagttgggatgaaatctataccgcaggtacgccatcgggcacc
agtggtgattacatcgatgacgaactcccggtctatcagggtgagacaacccagacattg
caagattacctgatgtggcaggttgagctgacgcccttttccgataccgatcgagctatt
gcgacttcaatcgttgatgctgttgatgaaaccggctatctcactgtctcgctggaagat
attctcgaaagcatgggtgatgaagagatcgacatcgaagagatcgaagccgttctcaaa
cgaatccaacgttttgatcctgtcggtgtcgcagcaaaagatctgcgtgactgtttgctg
atccaactttcccagtttgacaaatcaaccccctggctggatgaagcccgattaatcatc
agcgatcacctggatctactggcaaatcatgactttcgcagcttgatgcgtgttacgcgg
ctgaaagaagatgtgctgaaagaagcggttaatttgatccagtctctggatccccgtccc
ggtcagtcgatccagacgggagagccagaatatgtgatcccggatgtgctggtgcgtaaa
cataacggtcactggacagtggagctcaacagcgacagtattcctcgtctgcaaattaac
caacaatatgcagcaatgtgtaatggtgcacgtaatgacgccgacagccaatttattcgc
agcaacttacaggatgcgaaatggcttataaagagtctggaaagccgtaacgacacatta
ctgcgcgtcagccgctgcatcgtagaacaacagcaagccttctttgagcaaggcgaagaa
tttatgaaaccgatggtgctggcagatatcgccgaggccgtcgaaatgcacgaatcgacg
atttcccgtgtgaccacgcagaaatatctgcacagtccacgaggcatttttgaactgaag
tatttcttttccagccatgttaataccgaaggcggaggcgaagcctcatcaacggcgatt
cgggcgctggtgaagaaactgatagcggcagaaaatcccgcgaaacctctgagtgacagc
aagttagcaactatgctttctgaacagggtatcatggtggcgcgccgcaccgttgcgaag
taccgagagtctttatccattccgccgtcaaatcagcgtaaacaactggtttga
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