Escherichia fergusonii: EFER_3596
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Entry
EFER_3596 CDS
T00811
Name
(GenBank) putative exported protein; putative outer membrane protein
KO
K21449
trimeric autotransporter adhesin
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
efe02000
]
EFER_3596
Transporters [BR:
efe02000
]
Other transporters
Pores ion channels [TC:
1
]
EFER_3596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
ESPR
Motif
Other DBs
NCBI-ProteinID:
CAQ91068
UniProt:
B7LTK9
LinkDB
All DBs
Position
3681110..3686497
Genome browser
AA seq
1795 aa
AA seq
DB search
MRASIMNKIFKVIWNPATGSYSVASETAKSRGKKSGRSKLLISALVAGGLWSSFGASATG
NAPGTPVGSGDKWVAFGENSKVDANTTNTNVENPLTGVTEDAASVALGYYAEALGWRSTA
IGSRSEASGENSTAIGVEAKATAKNTTAVGDFAQATGSHSMALGGYSVSSGVESLAVGHV
AKATGEYNIAMGTNATTANTNSIAIGRDTEAATQGVGESNTGYALAIGSGTKAYKDYTIA
LGRNTKSSADYATAMGYMATASGTSSLSLGQNAKATNTNSIAIGLNSNASTINALALGTD
SKSSGDSTIAIGFGSKAGGTGSIALGSKSSAGGNNSIALGADSEASEDNTVSVGSSLLQR
RIVNMAAGAISSDSKEAINGSQLYAISQSVATRLGGGAGVASNGTLTAISFKLKRSEYST
VGDALQGIDNDTLHWDENNSAFSASYIVKNADGTITSSEKENKIINVEDGTISATSTDAV
NGSQLNATNTLINQIAGNTSTTYLQNNGAGINYVRTNDTGLTFKDASASGAGATAVGYNA
VASGKSSAALGDSSQATGEDALALGRSALASSADAIAIGAETQAAENATAIGNSAKAKGA
NSIALGAGSTTQGNNTIALGVNSFALGNQSLSLGTATQAKGVNSTALGNASLALGDSSLA
LGDASEAESEYSIAMGATAIASGIDAIAIGHNSKASDANTIALGNGSQSSGLNSIALGKA
SAVSGDNSLALGSNTSAVGINSVALGAGSIADLEDSVSVGNDSLKRKIVNVKNGTIKADS
NDAINGSQLYSVSNSVATSFGGGATVSDTGVFTGPKYNIGGNEYTNVGAALTALDNDALL
WDATAKSNAGAFSAGHGKDNTPSIITNVADGQINENSSDAVNGSQLYDLKQDALLWNSTA
FSAKHGTNGTDSKITNVLAGTVSSTSTDAINGGQLYSLADSFTTYLGGGADISDTGALTG
PTYTIGSTKYYNVGDALNAINSSFSTSLGDALLWDATAKKFSAMHDGKASVITNVSDGAI
SENSSDAVNGSQLYDTSKYIADALGGDAEVNADGTITAPTYTIANADYDNVGEALEAIDT
TLDDALLWDATANGGKGAFSAGRGVDNTDSKITNVANGAISATSSDAINGSQLYTTNKYI
ADALGGDAEVNADGTITAPTYTIANAEYNNVGEALDALDDNALLWDATANDGKGAYNASH
DGKASIITNVADGNIGEGSTDAVNGSQLNAANLLIEQNSQIINQLAGNTNTDYIEENGAG
INYVRTNDTGLTFTDASAAGIGSTAVGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVS
KREIVKGSRDTSVSEEGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTVR
QLQNAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVEANA
LNGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGNEDGQRQI
TNVAAGSADTDAVNVGQLKVTDERVAQNTQSITNLNTQVTNLDTRVTNIENGIGDIVTTG
STKYFKTNTDGVDANAQGKDSVAIGSGSIAAADNSVALGTGSVATEENTISVGSSTNQRR
ITNVAAGKNDTDAVNVAQLKSSEAGGVRYDTKADGSVDYSNITLGGSSGGTTRISNVSAG
VNNNDAVNYAQLKQSVQENKQYTDQRMAQMDHKLSKTESKLSGGIASAMAMTGLPQAYEP
GANMASIGGGTYNGESAVALGVSMVSDNGRWVYKLQGSTNSQGDYSAAIGAGIQW
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
ttgagagcatcaataatgaacaaaatatttaaagttatctggaatccagcaacgggcagt
tacagcgttgccagtgaaacggcgaaaagccgtggtaagaagtcggggcgcagtaagctg
ttaatttctgcgttggttgcgggtgggttgtggtcgtcgtttggggcaagtgctacaggt
aacgcaccaggtaccccagttggttctggcgataaatgggttgcttttggggagaactca
aaagtagatgccaacactacaaatacaaacgtagaaaatccattaacgggtgtcacagaa
gatgccgcatcggtagcactgggctattatgcagaagctctgggttggcggagtaccgca
attggctcacggagcgaagcaagtggtgaaaactcaaccgccataggggttgaagcaaag
gctaccgctaaaaatacaactgctgtcggagattttgctcaagcaacgggtagtcactcc
atggctcttggcggctatagtgtttcatccggggtggaaagtcttgctgtaggccacgtt
gccaaagctactggtgagtacaatatcgctatgggtacgaatgctacaaccgcaaatacg
aatagcatcgctattggacgagataccgaggctgcgacacaaggggtaggtgaatcaaat
acggggtacgccttggctatcggctctggtacgaaagcttacaaagattacactatcgca
ttaggacgcaatacgaaatcaagtgctgattatgcaactgcgatgggatatatggcaact
gcgtccggcacgagctctttatcattggggcaaaatgccaaagcaactaacacaaactct
attgcaatagggttaaacagtaacgcgtctacaataaatgctctcgctttgggtactgat
agcaagtcttctggagacagcactattgcaataggcttcggaagtaaagcaggcggaacg
ggaagcattgccttaggtagtaagtcttctgcaggtggtaataacagtattgcgcttggt
gcagattctgaagcaagtgaagataatactgtgtcggtaggctctagcttgctacagcgt
cgaatcgtcaatatggcggcaggtgcgatttcgtcagacagtaaagaagccattaatggt
tcccagctttacgccatcagccaatcggtagcaacaagattaggaggtggagccggtgtc
gcctcgaacggaactttaaccgctataagcttcaagcttaaacgcagtgagtacagcacc
gttggtgatgcgcttcaaggaattgacaatgacactcttcattgggatgaaaataactca
gcttttagcgccagctatattgtcaaaaatgccgatggtacgattaccagctctgaaaaa
gaaaacaaaatcattaatgtggaagatggcaccatttcagccaccagtacagatgccgtt
aacggctctcaactgaacgccacaaatacgctcattaaccaaattgccgggaataccagc
acaacctatctccagaataatggcgcaggcatcaactatgttcgcaccaacgacacaggc
ctgacctttaaagatgccagtgcttcgggagctggcgcgacagctgtaggatataacgct
gtcgcctcaggcaagagtagcgcggcattgggcgactcttcacaagctactggcgaagat
gctttagcgcttgggcggagtgcgctggcgagcagcgccgacgcgattgcgataggtgca
gagacccaagctgctgaaaatgctaccgccattggcaatagtgcgaaggcaaaaggggct
aatagcatagcgctgggcgctggcagcaccactcaaggtaataacaccatcgcattaggt
gtaaacagttttgcattgggtaatcaatctttgtcactggggaccgcaacgcaagctaag
ggggttaattctacagccttgggtaatgcaagcctggcattgggtgattccagcctggca
ctcggcgatgccagtgaggccgaatctgaatatagtatcgctatgggggcaaccgctata
gcatctggcattgacgccattgctataggtcataatagcaaagccagcgatgcaaatacg
attgcgttgggcaatggcagccagtcaagcggcttaaactctattgccttaggtaaggcc
agtgctgtatcaggcgataatagtcttgcacttggtagtaataccagcgctgtcggtatt
aactccgtcgcactgggggctggctctattgcagatctggaggatagcgtttctgtcggc
aacgactcattaaaacgcaagatcgtaaatgtgaaaaatggcacgatcaaagctgacagc
aatgacgccattaacggtagccagctttatagtgtaagtaactcagttgcaacctcgttt
ggtggcggtgccacagtaagtgataccggcgtatttaccggccctaaatataatattggt
ggcaatgaatacactaatgttggcgcggcccttaccgcactggataacgacgccctgtta
tgggatgcaaccgctaaatccaatgctggcgcattcagtgctggacatggaaaagacaat
actccgagcatcattaccaacgttgctgatggtcagattaatgaaaacagctctgacgcc
gtgaacggctcgcagttgtatgacctgaaacaagatgccttgctgtggaatagcacagca
ttcagcgccaaacacggcaccaacggtactgacagcaaaatcaccaacgtactggcaggc
actgtatcttccaccagcaccgatgccattaatggtggccagctttatagtttagccgat
tcattcacaacctatctcggcggtggtgccgatatcagcgatacaggagctctcaccggc
ccgacctacaccatcggttcgacgaaatactacaacgtaggtgatgccctgaatgcaatt
aactcatcgttcagcacttcacttggtgatgccctgctgtgggacgctacagcgaaaaaa
ttcagcgccatgcatgacggcaaagccagcgtgatcactaacgtttctgacggtgcaatc
tctgaaaacagtagcgatgctgtaaacggctcgcaactctatgacacgagcaagtacatt
gctgatgcccttggtggtgatgcagaagttaacgctgacggtactatcactgcaccgact
tacaccattgctaatgctgattacgataacgtcggtgaagctctggaggcaattgacacc
actctcgatgatgctttgctgtgggatgcaacagctaatggcggtaaaggtgcattcagc
gccggtcgtggggtagataacactgacagtaagattactaacgtcgcaaatggtgcaatt
tccgccaccagcagcgatgccattaacggctcacaactctataccactaataaatatatc
gcagatgctctgggcggtgatgcagaagttaacgctgacggtactatcactgcgccgact
tacaccattgcgaatgccgagtacaacaatgtcggtgaagctctggatgcactcgatgat
aacgctctgctgtgggatgcaacagccaatgacggcaaaggtgcctacaacgccagccat
gatggcaaagccagcatcatcacaaacgttgctgatggtaacattggtgaaggcagcacc
gacgcagttaacggttctcaactgaatgccgctaacctgctgatcgagcaaaatagccaa
atcatcaatcagcttgccggaaacaccaatacggactacatcgaagaaaacggtgcaggt
attaactatgtgcgtaccaatgacaccggtttaaccttcaccgatgccagcgcagcaggt
attggctctaccgctgtgggttataactctgttgccaaaggcgatagcagcgtagccatc
ggtcagggcagctacagcgacgttgatacgggtatcgctctgggtagcagttcagtctcc
aagcgcgaaatagttaaaggttctcgtgacaccagcgtgtcggaagaaggtgttgtgatt
ggttatgacacaactgacggtgaactgcttggtgcgttgtctattggtgatgacggtaaa
tatcgtcaaatcatcaacgtagccgatggttccgaggcccatgatgctgttacggttcga
cagttgcagaatgcgattggtgcagtcgcgaccacgccgactaaatacttccacgctaat
tcaacggaagaagattcactggctgtaggtactgactcgctggcaatgggtgcgaaaacc
attgtgaatggcgataaaggtattggtatcggttatggtgcctatgtggaggccaatgca
cttaacggcattgccatcggtagcaatgcgcaagtcattcatgtcaacagtattgcgata
ggtaatggttctacgaccactcgtggcgctcaaaccaattacaccgcctacaatatggat
gcaccgcagaactctgtaggtgaattctctgtcggcaacgaagacggtcaacgtcagatc
accaacgtcgcagcaggttcggcggataccgatgcagttaacgtgggtcagttgaaagtc
accgatgagcgcgtagcgcaaaatacccagagcattactaacctgaacactcaggttact
aatctggatactcgcgtgaccaatatcgaaaatggtattggcgatatcgtcaccacaggt
agcaccaagtacttcaagaccaacaccgatggcgtagatgctaacgcgcagggtaaagat
agcgtcgcaattggttccggctccattgctgccgcagataacagcgtggcactgggtaca
ggctccgtggcaaccgaagaaaacacgatctctgtgggttcctccaccaatcaacgtcgt
atcaccaacgtagccgcaggtaaaaacgacaccgatgctgttaacgtggcacagttgaag
tcttccgaagcaggcggtgtgcgttacgacaccaaagccgatggttctgttgactacagc
aacatcaccctcggtggtagcagtggcggtacaacgcgtatcagcaatgtttctgctggc
gtaaacaacaacgacgcagtgaactatgcgcagttgaagcaaagcgttcaggaaaacaag
caatacaccgatcagcgtatggctcagatggatcacaaactgtcgaaaaccgaaagcaag
ttaagcggtggtatcgcttctgcaatggcgatgacaggcttgccgcaagcttacgaaccg
ggtgctaacatggcctccattggtggtggtacatataacggtgaatctgccgtggcatta
ggtgtgtcaatggtcagtgacaacggtcgttgggtctacaaattacaaggtagtaccaat
agccagggcgattactcagccgcaattggtgccggtattcagtggtaa
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integrated database retrieval system
