Escherichia fergusonii: EFER_3609
Help
Entry
EFER_3609 CDS
T00811
Symbol
yibD
Name
(GenBank) putative glycosyl transferase
KO
K19354
heptose III glucuronosyltransferase [EC:2.4.1.-]
Organism
efe
Escherichia fergusonii
Pathway
efe00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
EFER_3609 (yibD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
efe01005
]
EFER_3609 (yibD)
Lipopolysaccharide biosynthesis proteins [BR:
efe01005
]
Core region
EFER_3609 (yibD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Glyco_tranf_2_4
Motif
Other DBs
NCBI-ProteinID:
CAQ91081
UniProt:
B7LTM2
LinkDB
All DBs
Position
complement(3698307..3699341)
Genome browser
AA seq
344 aa
AA seq
DB search
MMNSANKLSVIIPLYNAGNDFNACMESLIAQTWTALEIIIVNDGSTDNSVEIAKYYAKNY
SHVRLLHQANAGASVARNRGIEAATGKYVAFVDADDEVYPTMYETLMTMALEDDLDVAQG
NADWCVRETGRTWQSIPGDRIRSTGVLNGPEWLRLALASRRWTHVVWMGVYRREILIKNN
IKFIPGLHHQDIIWSTEVMFNALRVRYTEQSLYKYFLHNNSISRLKRQGNKNLNYQRHYI
KITRLLEKLNRDYADKIPIYPEFHQQISYEALRVCHAVRKEPDLFTRQRMIAEIFTSGMY
KRMVTNVRSAKVGYQVLLWSLRLWQWRDKTLSHQQNARKALNLN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacagtgcaaataaacttagtgttattatcccgttatataatgcgggaaatgat
tttaacgcctgcatggaatctttaatcgcgcaaacctggactgctctggaaatcattatt
gttaacgatggttcaacagataattccgttgaaatagcaaaatattatgcaaaaaattat
tcgcatgttcgtttgctgcatcaggcgaatgctggcgcatcggtagcgcgtaatcgcggg
atcgaggcagcgacgggcaaatatgtcgcttttgtcgatgctgatgatgaggtctatccc
accatgtacgaaacgctgatgacgatggcgttagaggatgatctcgatgtggcacaaggt
aacgccgactggtgcgtacgtgaaacgggcagaacatggcaatctattccaggtgatcgt
attcgttcaacaggcgttttaaatggcccggaatggctgcgattagcgcttgcttctcgc
cgctggacacacgtggtgtggatgggcgtttatcgccgggaaattcttattaaaaacaat
attaaatttattcccggtttgcatcatcaggatattatctggagcaccgaggtcatgttt
aatgccttgcgtgtacgttataccgaacaatctttatataagtactttttacataataac
tcaataagtcgtttgaaaagacaagggaataaaaaccttaattatcaacggcactatatt
aaaattacccgcttgttggaaaagttaaatcgtgattatgctgataaaattccgatttat
ccagaattccatcagcaaataagttatgaagcattacgtgtttgccatgcagtacgaaaa
gaacccgatctttttacccgtcagcgcatgattgccgaaatttttacttccggtatgtat
aaacgcatggtgactaatgtgcgcagcgctaaggtcggttatcaggtcttgctgtggtct
ttgcgtctgtggcaatggcgcgacaaaacattgtcgcaccaacaaaatgcacgcaaagcg
cttaatctgaattag
DBGET
integrated database retrieval system
