KEGG   Escherichia fergusonii: EFER_3724
Entry
EFER_3724         CDS       T00811                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
efe  Escherichia fergusonii
Pathway
efe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:efe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EFER_3724 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:efe03019]
    EFER_3724 (rhlB)
Enzymes [BR:efe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EFER_3724 (rhlB)
Messenger RNA biogenesis [BR:efe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EFER_3724 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CCDC138_C AAA_22
Other DBs
NCBI-ProteinID: CAQ91184
UniProt: B7LU75
LinkDB
Position
3818111..3819376
AA seq 421 aa
MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcatccgaaggtt
gtagaagcccttgaaaaaaaagggtttcataactgtacgcccattcaggcactggccctt
ccgctgacgctggcgggtcgtgacgtagccgggcaggcgcaaaccggtaccgggaaaacg
atggcgtttcttacgtcaacgtttcattatcttctctctcatcccgcgattgccgatcgc
aaggtgaatcagccgcgtgccttaattatggcaccgacgcgtgaacttgccgtgcagatc
cacgccgatgcggagccactggcgcaagctaccggcctgaagctgggtctggcttacggt
ggtgatggctacgacaaacagctgaaagtgctggaaagcggcgttgacattctgattggc
accacgggtcgtttaattgactacgccaagcagaaccacattaacctcggtgccattcag
gtggtggtactggacgaagccgatcgcatgtacgatctgggctttattaaagatatccgc
tggctgttccgccgtatgccgcctgcaaaccagcgcctcaacatgctgttctccgccacg
ctttcgtaccgggtacgcgaactggcattcgagcagatgaacaatgccgaatatattgaa
gtggaaccggaacagaaaacgggccaccgtataaaagaagagcttttctacccttctaac
gaagaaaaaatgcgtttgctgcaaacgctgattgaagaagaatggccagaccgagcgatt
attttcgccaacaccaaacatcgttgtgaagagatctggggccacctggcggcagatggt
catcgtgtcggtttgttgacaggcgatgtcgcgcagaaaaaacgtctgcgtatccttgat
gaatttacccgtggcgatctggatattctggttgccaccgacgttgctgcgcgtggtttg
catattccggcagtgacgcacgtctttaactacgatttacccgatgactgtgaagattac
gttcaccgtattggtcgtacaggtcgcgcaggagcaagcggtcactctattagcctggcg
tgtgaagagtatgcattgaatttgcctgctattgagacctatattggtcactcaattcca
gtaagcaaatacaatccggacgcattgatgaccgatctgccaaaaccgctgcgcctcacg
cgcccgcgcacaggcaatggtccgcgtcgtactggcgctccgcgtaatcgtcgtcgttca
ggttaa

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