Escherichia fergusonii: EFER_3837
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Entry
EFER_3837 CDS
T00811
Symbol
priA
Name
(GenBank) Primosome factor n' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
efe
Escherichia fergusonii
Pathway
efe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EFER_3837 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_3837 (priA)
Enzymes [BR:
efe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFER_3837 (priA)
DNA repair and recombination proteins [BR:
efe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EFER_3837 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
CEP104_ZnF
Motif
Other DBs
NCBI-ProteinID:
CAQ91272
UniProt:
B7LUR9
LinkDB
All DBs
Position
3933101..3935299
Genome browser
AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNEL
KAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA
TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVAELEFNDAALQALRKKGLCELASET
PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG
STHLVPVGLGTEQLEQTLAPMFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI
LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgctcacgttgccttgcccgttccgcttcctcgtacctttgactatctgctg
ccagaaggcatgacggttaaagccgggtgtcgcgtgcgtgtgccgtttggcaaacagcag
gagcgcatcggggttgtggtgtcagttagcgacgtcagcgagctgccgcttaacgagctg
aaagcggtagtagaagtgctggacgttgagccggtatttactcactccgtctggcgatta
ctgctatgggcggcagattactatcatcatccgattggcgatgtgctgtttcatgccttg
ccgattttactgcgccaggggcggcctgcggcgaacgcgccgatgtggtactggtttgcc
actgaacaaggtcaggcggtggatctgaacagcctgaaacgttcgccaaagcaacaacag
gcgctggcagcgttacggcaaggcaaaatctggcgcgatcaggtcgcggaacttgaattt
aatgatgccgcattgcaggcgctgcgcaaaaaaggcctgtgtgagttagcgagtgaaaca
ccagagtttagcgactggcgaacgaactatgccgtttctggcgagcggttgcgattgaat
actgaacaggccaccgccgttggcgccatccatagcgcagcggataccttctctgcctgg
ttgctggcgggcgttaccggttccggtaaaacagaagtttatttgagcgtactggaaaac
gtgctcgcacagggcaaacaggcgctggtgatggtgccggaaatcggcctgacgccgcaa
actattgcccgttttcgtgagcggtttaatgcgccagtggaagttctgcattccggcctg
aacgacagtgagcgcctttcggcgtggctgaaagcgaaaaatggtgaggcggcgattgtg
atcggcacccgctccgcgctgtttacgccgtttaaaaatctcggtgtgattgtcattgat
gaagagcacgacagttcctacaagcagcaggaaggctggcgctatcatgcccgcgacctg
gcggtgtaccgtgcgcacagcgagcaaatcccgattattcttggctccgcaacgcccgcg
ctggaaacgttatgcaacgtgcagcagaaaaaataccgcctgctacgcctgacccgtcgg
gcagggaatgcgcgtccggcaattcaacacgtgctggatttaaaaggtcagaaggtgcag
gctggtctggctccggcgttaatcacccgtatgcgccagcatttacaggccgacaaccag
gttatcctctttcttaaccgccgtggctttgcgcctgccttgctgtgccacgattgcggc
tggattgccgaatgcccacgttgcgatcactactacacgctgcatcaggcgcaacagcat
ttgcgctgtcaccactgtgacagccaacgcccggtgccgcgccagtgcccttcctgcggc
tccacgcacctggtacccgtggggctgggcaccgaacagcttgaacagacgctcgcgcca
atgttccctggtgtgcccatttctcgtatcgaccgcgataccaccagccgcaaaggggcg
cttgaacaacaactggcggaagtacatcgcggcggtgcgaggattttgatcggcacgcaa
atgctggcgaaaggtcaccatttcccggatgtgacgctggtggcgttactggatgtggac
ggcgcgctgttttctgcggattttcgctcggcagagcgttttgcccaactttatacccag
gtggctggccgtgccggacgtgcgggtaaacagggcgaagtagtgctgcaaacgcaccat
cctgaacatccgctgttgcaaacgttgctctataaaggctacgacgcctttgccgaacag
gcgctggctgagcggcgaatgatgcaactgccgccatggaccagccatgtgattgtgcgt
gcggaagatcataacaatcagcacgcgccattgttcctgcaacaactgcgtaatctcatc
ctctccagcccgctggcagacgagaaactctgggttctcggcccggttccggcgctggcc
cctaaacgtggcggtcgctggcgctggcaaattttgttgcagcacccttcccgcgtgcgc
ttacagcacatcatcaatggtacgctggcgcttattaatacaataccggattcccgcaag
gtgaaatgggtgctggatgtcgatcccatcgaaggctaa
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