Escherichia fergusonii: EFER_3995
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Entry
EFER_3995 CDS
T00811
Symbol
recF
Name
(GenBank) gap repair protein
KO
K03629
DNA replication and repair protein RecF
Organism
efe
Escherichia fergusonii
Pathway
efe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EFER_3995 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_3995 (recF)
DNA repair and recombination proteins [BR:
efe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EFER_3995 (recF)
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Ortholog
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GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
AAA_29
ABC_tran
AAA_16
AAA_13
Motif
Other DBs
NCBI-ProteinID:
CAQ91429
UniProt:
B7LK42
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Position
complement(4099978..4101051)
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AA seq
357 aa
AA seq
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MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV
IRHEQEAFILHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPE
GFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRPWDKE
LIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFTLTFSFQRGWEKETEYAEVLERNFER
DRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL
IDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcacccgcttgttgatccgcgatttccgcaatatcgaaaccgcggatctcgcc
ttatctcccggctttaactttctggtaggtgccaacggcagtggcaaaaccagcgtgctg
gaagccatctatacgctcggccacggtcgggcgtttcgcagtttgcagattggtcgtgtt
attcgccacgagcaggaggcgtttattctccacgggcgtttacagggcgaagagcgcgag
acggcgattggcctaaccaaagacaaacagggtgacagcaaagtccgcatcgacggtact
gacgggcataaggtcgccgagctggcgcatctgatgccgatgcaactgataacgccagaa
gggtttactttactcaacggcggccccaaatacagaagagccttcctcgactggggatgc
tttcacaacgaacccggatttttcaccgcctggagcaatctcaagcgattactcaagcag
cgcaatgcggcactgcgccaggtgactcgttatgaacagctacgcccgtgggacaaagaa
ctgatcccgctggcagaacaaatcagtacctggcgcgccgagtacagcgccggtatcgcc
gctgatatggccgatacctgtaagcaatttctcccggagtttactctgactttctctttc
cagcgcggctgggagaaagagacagaatatgctgaggtgctggaacgtaattttgaacgc
gatcgccagctaacctacaccgcgcatggcccgcataaagcggacttacgcattcgcgcc
gacggtgcgccggtggaagataccttatcgcgtgggcagcttaagctgttgatgtgcgcc
ttacgtctggcgcaaggagagttcctcacccgtgaaagcgggcggcggtgtctctacctg
atagatgattttgcctctgagcttgatgatgagcgtcgcgggctgcttgccagccgctta
aaagcgacgcaatcacaggtctttgtcagcgcgatcagtgctgaacacgtaatagacatg
tcggacgaaaattcgaagatgtttaccgtggaaaagggtaaaataacggattaa
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