Escherichia fergusonii: EFER_4003
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Entry
EFER_4003 CDS
T00811
Symbol
trmE
Name
(GenBank) GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efe03016
]
EFER_4003 (trmE)
Transfer RNA biogenesis [BR:
efe03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
EFER_4003 (trmE)
Prokaryotic type
Methyltransferases
EFER_4003 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
AIG1
ABC_tran
Roc
Arf
AAA_28
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CAQ91437
UniProt:
B7LK49
LinkDB
All DBs
Position
4106655..4108019
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AA seq
454 aa
AA seq
DB search
MSDNDTIVAQATPPGRGGVGILRISGLKAREVAETVLGKLPKPRYADYLPFKDADGSVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR
TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA
EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatgacactatcgtagcccaggccacgcctccgggacgtggcggcgttggc
atcctgcgcatctccggcctcaaagcccgtgaggttgccgaaaccgtgctgggtaaactg
cctaagccgcgctacgccgattatcttccgtttaaagacgccgatggcagcgtgctcgat
caggggattgcgctatggttccctggcccgaactcattcaccggcgaagatgtgctggaa
ctgcaaggtcacggcggtccggtgatcctcgacctgctgttaaaacgcattctgactatt
cccggcctgcggattgcccgtcctggtgagttttccgaacgcgcatttctgaacgataaa
ctcgatttagcccaggccgaagcgattgcagaccttatcgacgccagctcggaacaggcg
gcgcgctcagcgctaaactcgctgcaaggcgcgttctccgcacgggttaaccatctggtg
gaagccctcacccacttgcgcatttacgtcgaagcggcaattgatttccccgatgaagag
atcgatttcctctccgacggcaaaattgaagcccagctcaatgacgtgattgccgatctc
gacgcagtacgcgccgaggctcgtcagggcagcttgttacgcgaagggatgaaagtggtg
attgccggacgtcctaacgccggtaaatcgagcctgttaaacgcgctggcgggccgtgaa
gcggcaatcgtgactgatatcgccggaaccacgcgtgacgtactgcgtgagcatatccac
attgacggaatgccgctgcatatcatcgataccgccggattacgcgaagccagtgacgaa
gttgaacgtattgggatcgagcgcgcatggcaggaaattgaacaggccgaccgcgtgctg
tttatggttgatggcactacgacagacgctgttgatccagcagagatctggccggagttt
atcgcccgtctgccagcgaaactgccgatcaccgtggtacgcaataaagccgatatcacc
ggcgaaacgttggggatgagcgaagtgaacggtcacgcgttaattcgtctctctgcaagg
actggtgaaggtgtggacgtgctgcgtaaccatctcaaacagagcatgggctttgacacc
aacatggaaggcggcttcctggcgcgtcgtcgtcacctacaggcactggaacaggcggca
gagcacctgcaacagggtaaagcgcaactgttaggagcctgggcaggcgagctgctggcg
gaagaactgcgtctggcgcagcagaacttaagcgagatcaccggggaatttacttctgac
gacctgctggggcgaattttctccagcttctgtattggtaagtaa
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