Escherichia fergusonii: EFER_4052
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Entry
EFER_4052 CDS
T00811
Symbol
rbsR
Name
(GenBank) DNA-binding transcriptional repressor of ribose metabolism
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efe03000
]
EFER_4052 (rbsR)
Transcription factors [BR:
efe03000
]
Prokaryotic type
Helix-turn-helix
LacI family
EFER_4052 (rbsR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_35
HTH_3
MerR
HTH_38
HTH_31
Motif
Other DBs
NCBI-ProteinID:
CAQ91486
UniProt:
B7LK98
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All DBs
Position
4159124..4160116
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AA seq
330 aa
AA seq
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MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTR
TIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLL
LLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQHLIDNGFTRI
ACITGPLDKTPARLRLEGYRTAMQRAGLTIPAGYEITGNFEFGGGFEAMQTLLMHKERPQ
AVFAGNDAMAVGAYQALYQAGLQIPRDIAVVGYDDIELARYMTPPLTTIHQPKDELGELA
IDVLIHRMAKPEMQQQRLQLTPVLMARGSV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
ttggctacaatgaaagatgttgcccgcctggcgggcgtttctacctcaacagtttctcac
gtcatcaataaagatcgcttcgtcagtgaagcgattactgccaaagttgaagcggcaatt
aaagaactcaattacgcgccatcagctctggcgcgtagcctcaagctcaatcagactcga
accattggcatgttgatcactgccagtaccaatcctttttattctgaactggtgcgtggc
gttgaacgcagctgcttcgaacgcggctatagtcttgttctttgcaataccgaaggcgat
gagcagcggatgaatcgtaatctggaaacgctgatgcaaaagcgcgttgatggcttgctg
ttactgtgcacagaaacacatcagccttcgcgtgaaatcatgcaacgttatccgacagtg
cctaccgtgatgatggactgggcaccgttcgatggcgacagcgatctcattcaggataat
tcgttgctgggcggagatttagcgacgcaacatcttattgataatggttttacgcgaatc
gcctgtataacggggccgctggataaaacaccagctcgattgcgtctggaagggtatcgt
acggcaatgcagcgtgcaggcttaactattcctgcaggctatgaaattacggggaatttt
gagtttggtggtggttttgaagcgatgcaaacgctgcttatgcataaagaaagaccacag
gcggtatttgccggaaacgatgcgatggctgtcggcgcttatcaggcactctatcaggca
gggctacaaattcctcgggatatcgccgtcgtcggttacgatgatattgaacttgcgcgt
tatatgactccaccattgaccacaattcatcaaccaaaagatgaactgggtgaactggcg
attgatgtgctaatacatcgaatggcgaaacctgaaatgcaacagcagcgtctacaactg
acacccgttttaatggcccgtggttcggtttaa
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