Escherichia fergusonii: EFER_4160
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Entry
EFER_4160 CDS
T00811
Symbol
uvrA
Name
(GenBank) ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
KO
K03701
excinuclease ABC subunit A
Organism
efe
Escherichia fergusonii
Pathway
efe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EFER_4160 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_4160 (uvrA)
DNA repair and recombination proteins [BR:
efe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EFER_4160 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EFER_4160 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
NACHT
Viral_helicase1
T2SSE
cobW
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
CAQ91582
UniProt:
B7LL41
LinkDB
All DBs
Position
complement(4262796..4265618)
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY
MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH
VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaatatcaacctcgtt
atcccccgcgacaaactgattgtcgtcaccgggctttcgggttctggcaaatcctcgctc
gctttcgacaccttatatgccgaagggcagcgtcgttacgttgaatccctttccgcctac
gcgcggcagtttctgtcactgatggaaaagccggacgtcgaccatattgaggggctttct
cctgccatctcaattgagcagaaatcgacgtctcataacccgcgttctacggtggggacc
atcactgaaatccacgactatttgcgtctactgtacgctcgcgttggtgagccgcgctgc
ccggaccacgatgttccgctggcggcacaaaccgtcagccagatggtggataacgtgctg
tcgcagccggaaggtaagcgtctgatgctactggcgccaatcattaaagagcgtaaaggc
gaacacacgaaaacgctggagaatctggcaagtcagggctacatccgtgcgcgcatagat
ggcgaagtctgcgatctttccgatccgccgaaactggaattgcaaaagaaacataccatt
gaagtggtggttgatcgtttcaaggtgcgtgacgatcttacccaacgtcttgccgagtcg
tttgaaaccgcgctggagctttccggtggtacagcggtggttgccgatatggacgatcca
aaagcggaagagctgcttttctcagccaacttcgcttgcccaatttgcggctacagtatg
cgtgaactggagccgcgactgttttcgtttaacaacccggcgggtgcctgcccgacctgt
gacggccttggcgtacagcaatatttcgatcctgatcgtgtgatccaaaacccggaactg
tcgctggctggcggtgcgatccgtggctgggatcgccgcaacttctattatttccagatg
ctgaaatcgctggcagatcactataagttcgacgtcgaagcgccgtggggcagcctgagc
gcgaacgtgcataaagtggtgctgtacggttcaggcaaagaaaacattgaattcaaatac
atgaacgatcgcggcgatacctccattcgtcgtcatccgtttgaaggcgtgctgcacaat
atggagcgccgttataaagagacggaatccagtgcggtacgtgaagaattagccaagttt
atcagcaatcgcccgtgcgccagctgcgaaggaacgcgtctgcgtcgcgaagcgcgccac
gtgtatgtcgagaatacgccgctgcctgctatctccgacatgagcattggtcatgcgatg
gagtttttcaacaatctcaaactcgccgggcaaagagcgaagattgcggaaaaaatcctc
aaagagattggcgaccgcctgaaatttctcgttaacgtcggtctgaactatctgacactt
tcccgctcggcagaaacgctttccggcggtgaagcccagcgtatccgtctggcgagccag
attggtgcgggcctggttggcgtgatgtacgtgctggatgagccgtctatcggcctgcac
cagcgcgataacgaacgcctgctgggtacgcttatccatctgcgcgatcttggtaatacc
gtgattgtggtggagcacgacgaagacgcgattcgcgcggctgatcatgtgatcgatatc
ggtcctggtgcgggtgtacatggcggtgaagtggtcgcggaaggtccgctggaagcgatt
atggccgtgccagagtcgttaaccggacaatacatgagcggcaaacgcaaaattgaagtg
ccgaagaaacgcgttccagcgaatccggaaaaagtgctgaagctgacaggcgcacgcggc
aacaacctgaaagacgtgacgctgacgctgccagttggtctgtttacttgcatcacaggg
gtttcaggttccggtaaatcgacgctgattaacgacacactgttcccgattgcccaacgc
cagttgaatggtgcgaccatcgccgaaccggcaccgtatcgcgatattcaggggctggag
catttcgataaagtgatcgatatcgaccaaagcccaattggtcgtactccgcgttctaac
ccggcgacctataccggcgtgtttacgcctgtgcgcgaactgtttgcgggcgtaccggaa
tcccgtgcgcgcggttatacgccaggacgtttcagctttaacgtccgtggcggacgctgc
gaagcctgtcagggcgacggcgtgatcaaagtggagatgcacttcctgccggatatctac
gtaccgtgcgaccagtgcaaaggcaaacgctataaccgtgaaacgctggagattaagtac
aaaggcaaaaccatccacgaagtgctggatatgaccatcgaagaggcgcgtgagttcttt
gatgccgtacctgcactggcgcgtaagctgcaaacgctgatggatgttggcctgacgtat
attcgcctcgggcagtccgcaaccacactttctggtggtgaagcccagcgcgtgaagctg
gcgcgtgagctgtcaaaacgcggcaccgggcagacgctgtatattcttgatgagccgacc
accggtctgcacttcgccgatattcagcaactgctcgacgtactgcataaactgcgcgat
cagggcaacaccattgtggtgattgagcacaatctcgacgtgatcaaaaccgctgactgg
attgtcgacctgggaccggaaggcggcagtggtggcggcgaaatcctcgtctccggtacg
ccagaaaccgtcgcggagtgtgaagcatcacacacggcgcgcttccttaagccgatgctg
taa
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