Escherichia fergusonii: EFER_4365
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Entry
EFER_4365 CDS
T00811
Symbol
garD
Name
(GenBank) (D)-galactarate dehydrogenase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
efe
Escherichia fergusonii
Pathway
efe00053
Ascorbate and aldarate metabolism
efe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
EFER_4365 (garD)
Enzymes [BR:
efe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
EFER_4365 (garD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
CAQ91783
UniProt:
B7LMV5
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All DBs
Position
complement(4472846..4474417)
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AA seq
523 aa
AA seq
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MVNITIKNESPTAFYIKVHDTDNVAIIVNDNGLKAGTCFPDGLELIEHIPQGHKVALVDI
PADGEIIRYGEVIGYAARAILRGSWIDESMVVLPEAPPLHTLPLATKVPEPLPPLEGYTF
EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG
VAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLIGTDDVQGIPLENASI
VSLQDEKHVGFQSMVEDILQVAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN
PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGK
TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF
VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEE
TIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacatcacaataaaaaatgaatcaccaacggccttttatattaaagtgcatgac
acagataatgtagcaattattgttaatgacaatggtctgaaagcaggaacatgtttcccg
gacggactggaattaattgaacatattcctcaggggcataaagtcgcattagtagatata
cctgctgatggcgaaattattcgttatggtgaagtaattggttatgccgcacgcgcaatc
ctgcgtgggagctggatagatgaatctatggttgtactgccggaagcgccgccgttacac
acgctgccactggcaactaaagtgccggaacccttaccgccgctggaaggatacaccttt
gagggctatcgcaatgccgatggcagcgtgggcaccaaaaacctgctcggcatcaccacc
agcgttcattgtgtggcgggcgtggttgattacgtagtgaaaatcattgagcgcgatctg
ctgccaaaatacccgaacgtcgatggcgtagtggggctgaatcacttgtacggttgtggc
gtggcgattaacgctccggcggctgtagtgccaatacgtaccattcacaatatttcgctg
aaccctaactttggcggcgaggtgatggtgattggcctgggctgtgaaaagttacagcct
gaacgtttactgattggaacggatgatgtacaaggcattcctctggagaatgccagcatt
gtcagcttgcaggatgaaaagcatgtcggttttcagtccatggtcgaggatattttgcag
gtcgccgaacgccatctgcaaaaactgaatcaacgtcagcgggagacttgcccggcttcg
gaactggtggttgggatgcaatgcggtggtagcgatgcgttttctggtgtaacggcaaat
ccggccgtgggttatgcatctgatctactggtgcgctgcggtgcaacggtgatgttctcg
gaagtaacggaagtgcgtgacgcgatccatctgctgacgccgcgcgcagtgaacgaagag
gtcggcaaacgtctgctggaagagatggagtggtacgataactatctcaatatgggaaaa
accgaccgcagcgccaacccttctccgggcaacaagaaaggcggtctggcaaacgtagtg
gagaaggcactcggctccattgctaaatcgggtaaaagtgcaattgttgaagtgctgtcg
cccggtcaacgcccgactaaacgcggattaatttacgccgcgacgccagccagcgatttt
gtctgtggcacacaacaggtggcttcagggattaccgtgcaagtgtttacgaccggtcgc
ggtacgccgtatggcctgatggcagtacccgtcattaaaatggcgacccgcaccgaactg
gcaaaccgttggtttgacttaatggatatcaacgcaggcaccatcgccaccggcgaagaa
accattgaagaggtgggctggaagttgttccactttattctcgacgtcgccagcgggaag
aagaaaaccttctcagatcaatggggattgcataaccaactggcagtgtttaacccggca
cctgtgacctga
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