Effusibacillus dendaii: skT53_02720
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Entry
skT53_02720 CDS
T06872
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
eff
Effusibacillus dendaii
Pathway
eff02020
Two-component system
eff02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
skT53_02720
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
skT53_02720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eff03021
]
skT53_02720
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
eff02035
]
skT53_02720
Transcription machinery [BR:
eff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
skT53_02720
Bacterial motility proteins [BR:
eff02035
]
Flagellar system
Flagellar assembly proteins
Stator
skT53_02720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0122
Sigma70_r3
HTH_23
Sigma70_ECF
UPF0175
DUF134
ATPD_C_fung
PhyR_sigma-like
MarR
HTH_PafC
PCI
Motif
Other DBs
NCBI-ProteinID:
BCJ85287
UniProt:
A0A7I8D5E7
LinkDB
All DBs
Position
259971..260675
Genome browser
AA seq
234 aa
AA seq
DB search
MNELIEQYLPLVQQVVNRLSKGLPSHIAREDLVSMGTLGLIGAVERYTPERGVKFETFAT
WRIRGAVLDGLREMDWVPRQVRLWAKEIERSYAFVEANKKESATDEEVAAHLGISQEELQ
KRLTHISAGSVYSLEEFMYSDGDDTVGYNGLPDFSAENPDTKLSRDEIRNILVKTIDRLP
EKEKMVVALYYYEELSFKEIAEIMQVSSARISQLHTKAICRLRGALSRKRNDLI
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttaattgaacaatatctaccgctcgttcaacaggtcgtcaatcgtctgtca
aaagggttgccgtcccatattgcaagagaagatttggttagtatgggtacactcggcttg
attggagcggtggaacgctatacgcctgagcgaggtgtaaaatttgaaacttttgccacc
tggagaatccgaggggctgtgcttgacggtctgcgtgaaatggattgggtgccccggcag
gtacggctgtgggcgaaagaaattgaacggtcttacgcgtttgtggaagccaacaagaag
gaatcggccactgatgaagaagtcgccgctcatttgggaatcagccaggaagaattgcag
aaacgattgacacacatttcagccggttctgtctattctttggaagaatttatgtattcg
gacggagacgatacggttgggtataatggactgcctgatttttcagcagaaaatccggat
acgaaactgtctcgcgatgaaattagaaatattcttgttaagacgatcgaccgtctgccg
gagaaggaaaagatggtagtggcgttgtattattatgaagaattgtcttttaaagaaatt
gcggaaattatgcaagtcagttctgcacggatctctcagctccatacgaaagcaatctgc
agattgcgcggcgcactcagccgcaagagaaatgacttgatctaa
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