KEGG   Effusibacillus dendaii: skT53_02720
Entry
skT53_02720       CDS       T06872                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
eff  Effusibacillus dendaii
Pathway
eff02020  Two-component system
eff02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:eff00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    skT53_02720
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    skT53_02720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eff03021]
    skT53_02720
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:eff02035]
    skT53_02720
Transcription machinery [BR:eff03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     skT53_02720
Bacterial motility proteins [BR:eff02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    skT53_02720
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 UPF0122 Sigma70_r3 HTH_23 Sigma70_ECF UPF0175 DUF134 ATPD_C_fung PhyR_sigma-like MarR HTH_PafC PCI
Other DBs
NCBI-ProteinID: BCJ85287
UniProt: A0A7I8D5E7
LinkDB
Position
259971..260675
AA seq 234 aa
MNELIEQYLPLVQQVVNRLSKGLPSHIAREDLVSMGTLGLIGAVERYTPERGVKFETFAT
WRIRGAVLDGLREMDWVPRQVRLWAKEIERSYAFVEANKKESATDEEVAAHLGISQEELQ
KRLTHISAGSVYSLEEFMYSDGDDTVGYNGLPDFSAENPDTKLSRDEIRNILVKTIDRLP
EKEKMVVALYYYEELSFKEIAEIMQVSSARISQLHTKAICRLRGALSRKRNDLI
NT seq 705 nt   +upstreamnt  +downstreamnt
atgaacgagttaattgaacaatatctaccgctcgttcaacaggtcgtcaatcgtctgtca
aaagggttgccgtcccatattgcaagagaagatttggttagtatgggtacactcggcttg
attggagcggtggaacgctatacgcctgagcgaggtgtaaaatttgaaacttttgccacc
tggagaatccgaggggctgtgcttgacggtctgcgtgaaatggattgggtgccccggcag
gtacggctgtgggcgaaagaaattgaacggtcttacgcgtttgtggaagccaacaagaag
gaatcggccactgatgaagaagtcgccgctcatttgggaatcagccaggaagaattgcag
aaacgattgacacacatttcagccggttctgtctattctttggaagaatttatgtattcg
gacggagacgatacggttgggtataatggactgcctgatttttcagcagaaaatccggat
acgaaactgtctcgcgatgaaattagaaatattcttgttaagacgatcgaccgtctgccg
gagaaggaaaagatggtagtggcgttgtattattatgaagaattgtcttttaaagaaatt
gcggaaattatgcaagtcagttctgcacggatctctcagctccatacgaaagcaatctgc
agattgcgcggcgcactcagccgcaagagaaatgacttgatctaa

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