Effusibacillus dendaii: skT53_05930
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Entry
skT53_05930 CDS
T06872
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
eff
Effusibacillus dendaii
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eff03000
]
skT53_05930
Transcription factors [BR:
eff03000
]
Prokaryotic type
Helix-turn-helix
Other families
skT53_05930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA
Mg_chelatase
AAA_5
MCM
AAA_2
TIP49
AAA_16
AAA_3
AAA_7
bpMoxR
HTH_29
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BCJ85608
UniProt:
A0A7I8D629
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All DBs
Position
569202..571214
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AA seq
670 aa
AA seq
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MSIIPVSIYKQVNEADVVSIRDKLFEIWRKQLFEEQKDGHLSSKDSIIRDLVLQSWERCK
DYRLNPLIQGSTKNLSEHRLIDLQKSNEVLSLAKPIIKKLDHELSNTHHVVLFADQEGVI
LDAQGDPCTLQKIGNTVNAATGSHWGERWAGTNAIGTSIVLKQPVQLFSSEHYAQGCHQW
ICSAAPIRDPFSHEVVAVLNLSTENHIIQPRSMMMAIWGANEIERILFQNYYEAREMMQN
IYVNSVMKWKNHLVILSDSKGNPLWMNEDFPKEDVRAILSRGLEGNERDREKEWEEGVIL
VDSRYKARFKKIFWNGRLIGQLALLEEPARMNHHKVKQRNHAKYSFECLIGQSEAFQRTI
RLGKVAAQCDSNVLITGESGTGKELIANAIHQASSRCNQPFVAINCAAIPQNLLPSELFG
YVGGAYTGANPKGSIGKFEMADHGTIFLDEIGDMPLGLQVHLLRVIQEQEIMRLGGTHCI
PINVRVIAATNKNLPEEIKSGRFRQDLYYRINVIEIEMPPLRHRREDIPLLCEHFFKHFA
KRKGIGPCVITDEAKQILTQYPWHGNIRQLENVMEYAVNFSSNGQITPEDLPKDLARHDF
PLAGGHAENLNPVEQAEMKWILEILERTKMDVTKAAKELNMNRSSIYRKLKKYGYDVAKL
KQQFMERGIL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcattcctgtttcaatttacaaacaagtaaatgaagccgatgttgtgtcgatt
cgagacaaattgtttgaaatttggaggaaacagctgtttgaagaacagaaagatggacat
ctttcctccaaagattctattatacgtgatttggttttacaatcttgggaacgttgcaaa
gactatcggttgaacccgctgatccaaggttctacgaaaaatttgtcggaacatcgattg
atcgatttgcaaaaatccaacgaagtattatctttggcaaaaccgattataaagaaattg
gaccatgaactatccaatacccaccatgtcgttctgttcgcagaccaagaaggcgtgatt
ttggatgcgcagggtgatccgtgcactctgcaaaaaatcggaaatacggtcaatgctgca
accggttcgcattggggagagcgttgggcgggaaccaacgcaattggcacatctattgtt
ttaaagcaaccggtgcaactgttttcctcagaacattatgcgcaaggttgccatcagtgg
atctgttcagccgctccaatccgggatcccttctcgcatgaagtagtggcggttctcaat
ctctcgacagaaaaccacattatacaacctcgcagtatgatgatggccatttggggagcc
aatgaaattgagcggattctctttcaaaattactatgaagctcgagaaatgatgcaaaat
atttacgtcaatagtgtgatgaagtggaagaatcatctggttatcttaagcgattccaaa
ggcaatccgttgtggatgaatgaagactttcctaaagaggatgtccgcgccatcctctct
cgtggtttggaaggcaatgaaagggatcgggagaaggaatgggaagaaggagtgatcctt
gttgattcacgttataaagccagatttaagaagattttctggaacggccgtctgatcgga
caattagcactcttggaagaaccggcacgcatgaaccaccataaagtaaaacagcgtaac
catgccaaatattcattcgaatgcttgattggacaatccgaggctttccaacgcaccata
cgtttgggcaaagtggctgcccaatgcgattccaatgtgctgattacgggtgaaagcggc
accggcaaagaattgattgcaaatgccattcatcaggcgagcagcagatgcaatcaacca
tttgttgccatcaactgtgcagccatccctcaaaatttgcttcccagtgaattattcggc
tacgtaggaggcgcttacacaggcgccaatccgaaaggcagcattggtaaatttgaaatg
gctgaccacggaacgatctttttggacgagattggtgacatgccgttaggactgcaggtt
catcttctacgcgtcattcaagagcaagagattatgcggttgggtggtacacactgtatt
ccgattaatgtccgagtgattgcggccaccaacaaaaatcttccggaagagattaagtca
ggaagatttcgtcaggacctctactaccggatcaatgtgatagaaatcgaaatgcctcca
ttgcgccaccgcagagaagatattccattgctctgtgaacatttcttcaaacattttgcg
aaaagaaaaggaattggaccatgtgtgatcacggatgaagccaagcagattttaactcag
tatccttggcatggaaacattcgtcagttggaaaatgtgatggaatatgcagtaaacttc
tcttccaatgggcaaatcacaccggaagatttaccgaaagatctggctcggcacgacttc
cccctggcaggcggtcacgcagagaatctgaatccggtagagcaggcggaaatgaaatgg
atactggaaatattggaacgtaccaagatggatgttaccaaagcggccaaagaactaaat
atgaatcgaagttccatttatcgcaagctaaaaaaatatggatacgatgttgcgaagtta
aagcagcaattcatggaacgaggcatcctgtaa
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