Effusibacillus dendaii: skT53_10640
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Entry
skT53_10640 CDS
T06872
Symbol
spoVD
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
eff
Effusibacillus dendaii
Pathway
eff00550
Peptidoglycan biosynthesis
eff01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
skT53_10640 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eff01011
]
skT53_10640 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
eff01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
skT53_10640 (spoVD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Beta-lactamase2
DUF2100
Motif
Other DBs
NCBI-ProteinID:
BCJ86079
UniProt:
A0A7I8DAU5
LinkDB
All DBs
Position
complement(1018277..1020217)
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AA seq
646 aa
AA seq
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MRAGIGTLRKRLVIVLFALAAVFLALIGRLAYIQLIQAPWLTEKAEDLWRRNIPVEPKRG
VITDRTGEVLAYNGSSPTVVAIPSQIKDKQAAAESLAKTLGVKSQDILSKISKRTLLVYV
MPGGRKIDEEKAKAVRNLKLPGIYITEEGKRNYPLETLAAHILGFSGIDNQGLTGLEAWY
DSRLRGKAGSISFFANAKGERMPNENDTYTPPVNGQNLKLTIDKEISTFVQREVQNVVAN
YNPDGVMVIVADPKTGEILAMENYPTFNPSKYKEYPQEVFNRNLTIWKTFEPGSTFKIVT
LAAALEEKKVNLNEKFFDPGYYEVAGRRIRCWKAGGHGSETILEVVENSCNPGFMMMGQR
LGKEKLFEYIRKFGFGQKTGIDMPGEGNGILFKLNRVGPLELATTSFGQGVSVTPIQQVM
AVSAIANGGLLMQPHVAKEWTDPETGNVVETIQPKVQRRVVSEETAKTVRETLESVVAQG
TGKNAFREGYRIGGKTGTAQVASPGGGYKSGHYIVSFVGMAPVDDPRLVAYIAVDNPKAG
VVFGGTIAAPVIGNILADSLHYLGVPARKNGIPREYKYGDIVPVEVPQVAGLSLEEGQRA
MIQNAANLRVETVGSGKYIVAQAPTAGTKVPPGSTLRIYLSDQPVP
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgggtatcggaacacttcgcaaaagactggtgattgtactgtttgcgcttgct
gccgtttttttagcgctgatcggccgtttggcttatattcaattgatacaggctccgtgg
ctgacagaaaaggcggaagatctctggcgacgaaacattccggtagaaccgaaacgagga
gtcattaccgaccgcaccggggaggtgctcgcttataacggcagctcaccgacggttgtc
gcaattccttcgcagattaaagacaaacaggctgccgccgaaagtctggctaaaacatta
ggggtaaaatcgcaggacattctttccaaaatcagcaaacgtacgctgcttgtctacgtg
atgcccggcggtcgcaagattgacgaagaaaaagcgaaggcggttcgcaacttaaagctg
ccaggtatttatattacggaagaaggaaaacggaactatccattggaaacattggcggcg
catatactaggtttctcaggtatcgacaaccagggattaaccgggttggaggcctggtat
gacagccgtttgcgcggcaaggcgggaagcatctcgttttttgcaaatgcaaagggcgag
cgtatgccaaacgagaacgatacgtacacacctcctgtcaacggacagaatctgaaattg
accattgataaggaaatttccacttttgtgcagcgggaagttcagaatgtggtcgccaat
tacaatccggatggtgtcatggtgatcgttgccgacccgaaaacgggcgagatattggca
atggaaaattacccgacattcaatccaagcaagtataaagaatatccgcaggaagtattc
aaccggaatttgactatctggaagacgttcgagcctggttcgacgttcaagatcgtgacg
ctggcggctgcgttggaagagaagaaggtaaatctgaacgagaagttttttgatccgggt
tattacgaagtggcaggtcggcggatccgttgttggaaagcgggcggccacgggtcggaa
acgattctggaagtggtcgaaaactcctgcaaccccggttttatgatgatgggacagcgg
cttggcaaagaaaagctgtttgagtatattcgtaaattcgggtttgggcagaaaacgggg
attgatatgccaggtgaaggaaacgggattttgttcaaactaaatcgggtaggtccgcta
gaattggcgacaacttccttcggacagggcgtttccgttacaccgatccaacaggtaatg
gctgtttccgccattgcgaacggcgggcttctgatgcagccgcacgtcgcgaaagaatgg
accgatccggaaaccggcaatgtggtcgaaacgattcaaccaaaagtgcaaagacgggtg
gtgtcggaagaaacggccaaaacggtccgcgaaacgctggaaagcgtggtggcccaagga
accggtaagaacgcattccgggaagggtatcggattggcgggaaaaccggtacggcgcag
gtggcatcgccgggcggcggatacaaatcgggccactatattgtttcgtttgttggaatg
gcaccggtggacgatccgcgcctggtcgcctacatcgctgttgacaatccgaaagcgggc
gtcgtcttcggtggaacgatcgccgctcccgtgatcggaaatattttagccgattcgctt
cattatctgggtgttccggcaaggaaaaacggaattcctcgcgaatacaaatatggagat
atagttccggtggaagtgccgcaggtggcgggactgagtttggaagagggacagcgagcg
atgattcaaaatgcggccaatctgcgggtggagacggttggcagcggcaagtatattgtg
gcgcaggcgccgacagccggtacgaaagtgccgcccggttcaacgctgcgaatctatctg
agcgaccagcctgttccttga
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