Effusibacillus dendaii: skT53_10650
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Entry
skT53_10650 CDS
T06872
Symbol
pbpB
Name
(GenBank) penicillin-binding protein 2B
Organism
eff
Effusibacillus dendaii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
BCJ86080
UniProt:
A0A7I8DC44
LinkDB
All DBs
Position
complement(1020347..1022530)
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AA seq
727 aa
AA seq
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MIDHQASSRSKWVRLFILLGLVLLIGRLAYIQIFKSAAWAQAAESIWKEKDVVPAVRGTI
YDRNGKKLAYTTVAYDVQADLSIMEAARKEAAGGKTKDGKPVDPEQGDPAAYARKLAPLL
QMTEQQIYEKLKPKPNVIGIPLKQEVDSETADKIDKLKLKGIFMTKTTMRHYPNGAFASH
LLGFVTQDGKGGAGVELQYNDVLKGTDGVRKYLRDRNGNPLPYEQELLTPAVDGKDVYLT
IDQTIQHYVEDALDRLVNQYKPLNASIVAADPNTGEILGIANRPSFDPNKFAEADQRVLD
NNRAVDAAFEPGSTFKIVTLTAALNEHVVNLNDTFQSGKIQVKGATHPISDWNGGVGWGR
ITFREGMDHSSNVAMVTLAQRLGWDRLYKYIDLYGFNQKTGIDLPGEGSPILFTDKDKND
LNLAVTSFGQGISVTPMQQVAAVTAVANGGSVMRPFVMKEIRDPKTGATIQEQKPHVISH
VATPEVMAEMRSVMEEVVSSDTSKAGYIEGYRIAGKTGTAQIAKPTGGYETDRFNCSFIG
FAPVDNPKLLVYVTVDSPNNDLQFGNVVATPFARDVFANVLPYLGVQPEGKSKQPDDSAA
AKQVVMTTVPDWQGMTGNQALQSAGSGKIRLQVIGSGEKVTAQWPKAGSKVPQGTSAIVM
TSGAQDAQGNVQVPDLTGRTLRESAEILSMLNLNLETSGSGFVISQANPPGTKVPAGTVI
KVQLGVK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcaccaggcgagttcgcgttccaaatgggtccgactgttcattttgctcgga
ttggttttgttgattgggcggctggcatatattcagattttcaagagcgctgcttgggcg
caagcggccgagagcatatggaaagaaaaagatgtggtgcccgctgttcgcggcaccatt
tatgaccgaaacggaaaaaaactggcttacacgactgtcgcctatgatgtgcaagccgat
ctcagcattatggaggcggcaaggaaagaggcggcaggtggcaaaacgaaagacggcaaa
ccggtcgatccggaacagggcgatcctgccgcttacgccaggaaattggcccccctcctg
caaatgaccgaacagcagatttacgaaaagttaaaaccgaaacctaacgtcattggcatt
ccgctcaagcaggaagtcgattccgagacagccgacaagattgacaagttgaaacttaaa
gggattttcatgacaaagacgaccatgcgccactatccgaacggtgcgttcgcctctcac
ttgttggggtttgtgacacaggacgggaagggaggcgcgggggttgaactgcagtacaat
gacgtactgaaaggtacggatggagtccgcaagtatttacgggatcgaaacggaaacccg
ttgccctatgaacaggaactcctgactcccgccgtcgacggcaaagacgtatatctgacg
atcgatcagacgattcagcattatgtggaagacgctttagaccgtttggtcaatcagtat
aaaccgctaaacgcttcgattgtggcggcagacccgaacacgggggaaattctgggaatc
gcaaaccgtccgtcgttcgatccaaataaatttgcggaagcggatcaacgggttcttgac
aataatcgggcggtcgacgccgcgtttgaacctggttcgacgttcaaaatcgtaacgttg
accgccgcattgaacgaacatgtggtcaatttaaatgacacgtttcaatccggtaaaatt
caggtgaaaggtgccacccatccgattagtgactggaacggaggcgtcggttggggaaga
atcacattccgggaaggaatggaccattccagtaacgtggccatggtaaccttggcacag
cgattaggatgggacagactctataaatatattgatttgtatggtttcaatcaaaaaacg
ggaatcgatttgccgggagaaggaagtcctattttatttacagataaggacaagaatgat
ttgaacctggcggtaacgtcattcggccaagggatttccgtaacgcccatgcagcaggta
gcagccgtgacagcagtagcaaacggcggcagtgtgatgcgtccgtttgtaatgaaagaa
atccgtgatccaaagaccggggcgaccattcaggaacagaaaccgcatgtgatcagccat
gtggcgactccggaagtgatggcggaaatgcgcagcgtcatggaagaagtggtcagcagc
gacacctcgaaagcgggctatattgaggggtaccggattgccgggaagacaggaacggcc
caaatcgcgaaaccaacaggcggttatgaaacggatcgtttcaattgttcgttcatcgga
tttgccccggtggacaatccgaaattgttggtctatgtgacggtcgattctccgaacaac
gatttgcagtttggcaatgtggtggctacgccgtttgcccgcgatgtgtttgccaatgta
ttgccctatctgggggtacaaccggaaggcaaatcgaaacagccggatgacagtgcagcg
gcaaaacaggtggttatgacaaccgttcccgattggcaaggaatgacgggaaatcaggcc
ttgcagtcggccggatcgggcaaaatccgtctgcaggtgattggcagcggcgagaaagta
accgctcagtggccgaaagcgggcagcaaggtgccgcagggaacatcagccatcgtaatg
acaagcggtgcgcaggacgcgcagggaaatgtgcaagttcccgatttgaccgggaggaca
ttacgggaatcggcagaaattttgtcgatgctgaatttgaatttggaaaccagcggttcc
ggttttgtaatcagtcaggcgaatccgcccgggacaaaagtgccagcgggcactgtcatt
aaagtgcagcttggtgttaaatag
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