Effusibacillus dendaii: skT53_11370
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Entry
skT53_11370 CDS
T06872
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
eff
Effusibacillus dendaii
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eff03000
]
skT53_11370
Transcription factors [BR:
eff03000
]
Prokaryotic type
Helix-turn-helix
Other families
skT53_11370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS
Mg_chelatase
AAA_5
PAS_4
AAA
AAA_2
PAS_8
PAS_9
AAA_7
ATPase
AAA_30
AAA_16
Diguanyl_cycl_sensor
nSTAND3
TIP49
HTH_17
HTH_30
NUMOD1
AAA_22
HTH_50
Phage_NinH
SMN_Tudor
HTH_Tnp_ISL3
AAA_3
Motif
Other DBs
NCBI-ProteinID:
BCJ86152
UniProt:
A0A7I8D9W0
LinkDB
All DBs
Position
complement(1084920..1086854)
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AA seq
644 aa
AA seq
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MNVKLAIISHPLTGPIFRELVEEKKLNDSVLYFEATFGNLCPILATIREEKNIDVIVTAW
GHAAFLGDLNIPVVLIKVTSFDLLNAMSEAKRIDRQVVVMRYGTPFENLSCYSELVDMKI
VSDCYMDRQDAREKIDRYFRFGYRTFIGTSLMCDLVSEMGGKAIYIYSKDSISQALDNAL
QLAHSRREEIEKREQFRLIVEHSGMGIITTDKQGVCVLVNSKAEEMLNMKRSELTGRKMK
SFWPISKLAESLAHGEPYTQQIETIHRKQYLVDYIPTIVNKNPSGCMIVFQDFATVQKAE
RTIRQNLYDSGHFARYQFCDIIGQSQEMRKTIHLAKLYAQNDSTVLITGESGTGKELFAQ
SIHNASGRKGKPFVAINCAVFTEHLLESELFGYEDGAFTGAKKGGKPGLFEMAHEGTLYL
DEIGELSLELQSRLLRVLQEKQVRRVGGHNLMPVDVRILAATNRDLNTMVLQGKFRQDLY
YRLNVLHLKVPPLRERPDDLPHLIKSLCAKYGVADQADEIVSELLPRVQQYGWPGNVREL
ENTVQRLVVVKQGESFSEEQSLSDIIFYDLSIGQLTFTSSSDNSQQGVSLVKSDKTEYPN
LTEFKKQNEREMIHQVLAKCNGNKTEAARYLGISRATLWRKLNF
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaattggcgattattagccatccgttgactgggccgatttttcgggagttg
gttgaagaaaaaaagttgaatgattcggttttgtactttgaagccacgtttggtaatttg
tgcccgattctggcgaccattcgggaagaaaaaaatatcgatgtaattgtaactgcttgg
ggccatgccgcttttctcggggatctaaacattcctgtggttttgattaaggtgacgagc
tttgatttgttaaacgcaatgtcagaagcgaagcggatcgatcgtcaggttgtggtcatg
cgttacggaactccgtttgagaatttaagctgctattcggaacttgtcgatatgaaaatt
gtgtccgattgctatatggatagacaagatgcccgggaaaaaattgatcggtactttcga
ttcgggtaccgaacttttatcggtaccagcttgatgtgtgatcttgtcagtgaaatggga
ggtaaggccatttacatatactcaaaagattcaatctctcaggcgttggataacgccttg
caattggcgcacagccgaagggaggaaattgaaaagcgcgagcaatttagactgattgtc
gaacattcgggaatggggattattaccacagacaagcaaggggtttgtgtactggtcaac
tcgaaagcggaagaaatgctcaatatgaagcggtctgaattgaccggcagaaaaatgaaa
tcgttttggccaatttcaaaactggccgaatctcttgcgcatggtgaaccgtatactcaa
caaatcgaaacgattcaccgtaagcagtatttggtcgattatattccaaccattgtgaat
aaaaacccgtcaggctgtatgattgtgttccaagattttgccactgtccaaaaagcggag
cgtacaatcaggcaaaatctctacgacagtggtcattttgcacgatatcagttttgcgac
attattggtcaatcgcaagaaatgcgaaaaacgattcatctggccaaactatatgcgcaa
aacgattccacggtgttaatcacaggggaatcagggacaggaaaggaattgtttgcgcaa
agtattcataatgccagcgggaggaaagggaaaccgtttgttgccataaattgcgccgtg
tttacagagcatttactggaaagcgaactgttcggatatgaagatggcgcctttacaggc
gcaaaaaaaggaggaaaaccaggcctgtttgaaatggcacacgaaggaacattatatctt
gatgaaataggggaactctccttagaactgcagtcaagattgcttcgtgtattacaagaa
aaacaggtccggcgggtcggcggtcacaatttaatgccggtcgatgttcggattctagct
gcgacaaatcgtgatttaaatacaatggttttgcagggcaaattcagacaggacctgtat
taccggctgaatgttttacatcttaaagttccaccgttgcgtgaacgccctgatgatctt
ccgcatttgattaaaagtctgtgtgcaaaatacggcgttgcggatcaggcggatgagatt
gtgtccgaacttttacccagagtccaacaatacggttggcctgggaacgtgagggaactg
gaaaatacggttcaacgtttggttgtggtcaaacagggagaatcgttctccgaagagcag
tccttgtcagatatcatcttctacgatctgtctataggtcaattgactttcacttcatca
tcagacaattcccaacaaggtgtgtccctcgtcaaaagcgataaaaccgaatatccaaac
cttacagaattcaaaaaacagaacgaacgggaaatgattcatcaggtcttggccaaatgt
aacggaaataaaacggaagctgcccgttatctcggtatcagccgtgcaactctttggcgg
aaattgaacttttga
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