Effusibacillus dendaii: skT53_14940
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Entry
skT53_14940 CDS
T06872
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
eff
Effusibacillus dendaii
Pathway
eff03030
DNA replication
eff03430
Mismatch repair
eff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
skT53_14940
03430 Mismatch repair
skT53_14940
03440 Homologous recombination
skT53_14940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eff03032
]
skT53_14940
03400 DNA repair and recombination proteins [BR:
eff03400
]
skT53_14940
Enzymes [BR:
eff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
skT53_14940
DNA replication proteins [BR:
eff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
skT53_14940
DNA repair and recombination proteins [BR:
eff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
skT53_14940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
EMC3_TMCO1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BCJ86509
UniProt:
A0A7I8DC08
LinkDB
All DBs
Position
1413065..1414042
Genome browser
AA seq
325 aa
AA seq
DB search
MALENQSSAAQIKSETHGLAAFIDVETTGLDPFDDEIIEFSIVLFEFDRKTGEFTDIIDE
YTGLKEPIGKRIPRAATRVNGITNDMVEGEELDDDKIISLIHSAEFIVAHNAKFDRSFVE
MEYPKLDWTNKPWLCSMNGIGWKRKGFASKGLQNLLKDHGIEVNNAHRAANDVRAALMLL
SQKNSKGEYYFKELLRNNERKEKARLKKIQNQVAENQVRPEPREKQSLEMKVNIADVIRE
IQIEKGEIPQEEAAKIEPNSTKSSIKPMWYVFWLILLVIVFISFGFIGAGVVVGGFVWWF
GRKNPKNKFQPTRAFLFQEGVRWHR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggaaaatcaaagttcagccgcgcaaataaaatcggagacgcatggattagct
gcgtttatcgatgttgaaacgacagggttagatccatttgatgatgaaattatcgagttc
tcaattgttctttttgaatttgatcgtaagacaggagaattcaccgatattatagacgaa
tatacaggacttaaagaaccgatcggaaaacgcatcccgcgagccgcgactcgtgtcaat
gggattacaaacgatatggtagaaggcgaagaattagatgacgacaagattatttcttta
attcattcagcggagtttattgtggctcataacgctaaattcgatcgctcatttgtcgaa
atggaatatccaaaacttgattggacgaacaagccgtggctctgctccatgaatggcatt
ggctggaagcgtaaagggtttgcatccaaaggtctgcaaaatcttttgaaagatcatgga
attgaagttaataacgcgcatagagcggcaaatgatgttcgcgccgctttgatgttgctt
tctcaaaaaaattcaaaaggtgaatattactttaaagaattactccgaaataacgaacgt
aaagaaaaggccagattgaagaaaatacagaatcaagttgcagagaatcaagtaagacca
gaaccacgagaaaagcagagtcttgaaatgaaagtaaatattgctgatgttattagagaa
atacaaatagaaaaaggcgaaattccgcaagaagaagctgccaaaattgaaccgaatagc
acaaaatcaagcattaaaccgatgtggtatgtgttttggttaatccttttggtaattgta
tttatttcctttggatttatcggggcgggtgttgttgtaggcggatttgtttggtggttt
ggacgaaaaaatccaaaaaataaattccagcccacccgggcttttctttttcaggaggga
gtaagatggcatcgatag
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