Effusibacillus dendaii: skT53_18820
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Entry
skT53_18820 CDS
T06872
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
eff
Effusibacillus dendaii
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eff03000
]
skT53_18820
Transcription factors [BR:
eff03000
]
Prokaryotic type
Helix-turn-helix
Other families
skT53_18820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
HTH_30
HTH_28
Mg_chelatase
AAA
HTH_29
AAA_2
HTH_23
AAA_16
HTH_38
HTH_17
TrmB
HTH_7
HTH_Tnp_Tc3_1
Mga
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
BCJ86897
UniProt:
A0A7I8DA96
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Position
complement(1785804..1787747)
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AA seq
647 aa
AA seq
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MKNPFLALDAWSSPHSVRSKLESAWESFIIRQRLDLDVRPLVVESWQRCHSLGIHPLQSK
PPILFSEEYIQDYLSDNRLFFDLNPIVRELKDLANDSGHLVVLTDENGTILTIDGDISLR
RKAENMDFVIGASWAESNAGTNGIGISLVNRSPVQVFAAEHFCQEVHSWTCSASPIRDPA
TQQILGVLDLTGPWQTAHPHTLSVVVSAVRAIEERLRHTLEVERTKVLEYYLSGISRSPN
TLMVALDRGGTVIKAVPKMYEYGWIDSNNRLVGCPGVSSTMAEMNWEVEGKNGKWDFVLR
TCFHEDHPIGAIVQAVPPNSGSRSYAELSTKYSFGNMIGRSSKFLAALSEARSAARSELP
VLIEGESGTGKELLAQSIHAASCRETGPFVAVNCGAIPKELAASEFFGYEGGTFTGARKD
GREGKFELADGGTIFLDEIGELPLDLQTLMLRVLEEKEVVRLGGKKPIRVNVRIIAATNR
DLFADIENGKFRRDLYYRLNILSLRVPPLRERQGDIPLLLKHFLQKVCHEMGRSPIQVDE
EALRVLEDYPWPGNVRELRNIAYRIAAKLTGNLVRAVDLPEEIHGGRRNRIEVRQNFLTT
RTAFRNQETQLILAVLNELNGNVSETARKLGIHRSTIYRKLGRNLQS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatccgtttcttgctttagatgcatggtcttctcctcattctgtaagatcgaaa
ttggagtcagcctgggaaagttttataatcagacagcgtctggaccttgatgtccgacct
ttggtggttgaatcatggcaacgttgtcattcactggggattcatcctctccagtcaaag
ccgccaattcttttctccgaagaatatattcaagactatttgtcagataaccggctgttc
tttgatctgaatcctatagtacgcgaactgaaagacctggcaaatgattccggtcatttg
gtggtattaaccgatgaaaacggcactattttaacaattgacggagatatttccttaaga
agaaaagcagagaatatggatttcgttattggagcatcctgggctgagagtaatgcgggt
accaacggtataggtatttcacttgtaaaccgttcgcccgtgcaggtttttgcagccgag
cacttttgccaagaggtccatagttggacctgttcggcatctccgattcgagacccggcc
actcagcaaattttaggggttctcgatcttacgggaccgtggcagaccgcccatccacac
actctctccgtggtcgtgtcggctgtgagggcgatagaagaacggcttcgccacacatta
gaggtcgaacggacaaaagttctggaatattatttgagtggaatttctcgcagtccaaat
acacttatggttgcactggatcgtgggggtacagtgatcaaagcggttcctaaaatgtat
gaatatggctggatcgattcaaacaatcgcctggtaggctgtcctggtgtttcatcaaca
atggcagaaatgaattgggaagtcgaaggaaagaacggaaagtgggactttgtactccgt
acctgtttccatgaagatcatcctattggcgctattgtccaagccgttccgcccaatagc
ggcagtcggtcttacgcagagctctcaaccaagtattcatttggcaatatgatcggccgt
tcatcgaaatttttggccgcactgtcggaagcacgatcggctgccagaagtgagttgccg
gttttgattgagggagagagtggaacgggaaaagaattattggctcagtcaattcacgct
gcaagttgccgggagacaggaccttttgtggcagtaaattgtggtgctataccaaaggaa
cttgctgccagtgaattttttggttatgagggtggcacgtttacgggagcaagaaaagat
ggaagagaaggcaaattcgaactggctgacggaggaactatattcctcgatgaaataggt
gaattgccgcttgatttacagactcttatgctgcgggttcttgaggagaaggaagttgtc
cgcttgggcgggaaaaagccaatccgggtaaacgtacgaattattgccgccacgaatcgg
gaccttttcgctgatattgaaaatggtaagtttcgccgggacctgtactaccgattaaat
atactatcgctgcgggttccccctctacgggaaagacagggagatattcctcttctgttg
aaacatttcttgcaaaaagtatgccatgagatggggcgatcaccgattcaggtggatgag
gaagcattgagggttttggaagattacccgtggccgggcaacgttcgggaactgcggaat
attgcctatcgaatagccgccaaattgacaggaaatctcgtgcgtgcggtcgatttgccg
gaagaaatacatgggggcaggaggaatcggattgaagtgagacagaatttcttgaccaca
aggactgcattcaggaaccaggaaacacaactcatccttgcggtgctcaatgaattaaat
ggaaacgtatcagagacggcacgtaagttgggtattcatcggagcacgatttatcgaaaa
ctcggtcgtaatctccaatcttaa
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