Effusibacillus dendaii: skT53_21150
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Entry
skT53_21150 CDS
T06872
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eff
Effusibacillus dendaii
Pathway
eff03420
Nucleotide excision repair
eff03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
skT53_21150 (pcrA_2)
03430 Mismatch repair
skT53_21150 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eff03400
]
skT53_21150 (pcrA_2)
Enzymes [BR:
eff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
skT53_21150 (pcrA_2)
DNA repair and recombination proteins [BR:
eff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
skT53_21150 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
skT53_21150 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DUF2067
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BCJ87130
UniProt:
A0A7I8DEZ9
LinkDB
All DBs
Position
complement(2006444..2008645)
Genome browser
AA seq
733 aa
AA seq
DB search
MISIGNADSVLEGLNPQQKEAVLHRDGPLLIMAGAGSGKTSTLTRRIAYLIHQHRVAPWS
ILAITFTNKAAREMKERVEKWVGPIVADMWVSTFHSMCVRILRRDIEKIGYASSFTILDT
ADQLTAIKQCLNELNYDQKKFEPRAMLSHISSAKNQLKGPSAYAREAKDFFQQVAAQVYE
LYQKRLFANNSLDFDDLIMKTVELFENNRDVLERYQDKFLYIHVDEYQDTNHAQYKLVKL
LSEKHRNLCVVGDSDQSIYGWRGADIWNILNFEKDYPDASVIKLEQNYRSTKRILAAANA
VIENNTQRKEKNLWSDKPEGPLIELHRAMNEHEEAYFIVEQIQRALDDGFSYRDCAVLYR
TNAQSRVIEDVLLKSSIAYTIVGGIRFYERKEIKDVLAYLRLVANWNDDISLSRILNVPK
RGIGDGTLDKIRAYANSKGIPLFAAMAEVEQIGLTARFVKPIKDFVLLIRNLSTQQQYLS
VTELTEEVLKLSGYRTELMAEKTIEAESRLENLNEFLSVTQEFEKRYPGEGLLTFLSEVA
LVADVDQMEADSDAVTLMTLHSAKGLEFPVVFLAGMEEGVFPHMRSLDDPDEMEEERRIC
YVGITRAEERLYLTTCFSRTLFGQTRMNAESRFLKEIPEELLNESGYANRTAGNVTRTPR
NGNIGTHIPKGFGADLSVSWQTGEKVMHKTWGQGTIVESSGEGEDLELTVQFAPPTGIRK
LLAKFAPITKLRE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaatcggcaacgcggattctgttttggaaggattgaatccgcagcaaaaagaa
gcggtgctgcatcgtgacggaccgttgttgattatggccggcgccgggtccggtaagaca
agcacgctgacgagacggattgcgtacttgattcaccagcatcgggtggcgccctggtcg
attttggcgattacgtttaccaataaagcggcacgcgaaatgaaagaacgggttgaaaaa
tgggtggggccaattgtggccgatatgtgggtatccacgtttcattcgatgtgtgtgcgg
attttgcggcgtgacattgaaaagatcgggtacgcatccagcttcaccattcttgatacg
gctgaccagctgaccgcgatcaaacaatgtttgaacgagttgaattacgatcagaaaaag
tttgaaccgagggcgatgttaagccatatttcgagtgccaaaaatcaattgaaaggacct
tcggcttatgcccgggaagcgaaagacttttttcagcaggtggcggcgcaggtctacgag
ttgtaccagaaacggctgtttgccaacaactcgctcgattttgacgacctgattatgaaa
acggttgaactgttcgagaacaaccgggatgttttggaacggtatcaggacaaattttta
tatattcatgtggacgagtatcaggatacgaaccatgcgcagtacaaactggtcaagctg
ctgtccgaaaaacaccgcaatctgtgtgtggtcggcgattcggaccaatcgatttacgga
tggcgcggggcggatatctggaacatactgaactttgagaaggattatccggatgcgtcg
gttatcaaactggaacagaattatcgctccaccaagcggattttggcggcggccaatgcg
gtgattgaaaacaatacgcagcgcaaggagaagaatttgtggtcggacaagccggagggg
ccgctgatcgaactgcaccgggcgatgaatgagcatgaagaagcgtattttatcgtggag
cagattcaaagagcattggacgacggtttttcataccgtgattgtgccgtgctgtatcgg
acgaacgcacaatcccgggtcattgaggatgtattgctcaaatcgtcgatcgcgtacacg
attgttggcggcatacgtttctatgaacggaaggaaattaaagatgtgctggcgtatctg
cggctcgttgcaaactggaacgacgacatttcgttgtcccgcattctcaatgttccgaaa
cggggaatcggtgacggaaccttggacaagatccgcgcctacgcaaacagcaaaggaatc
ccgttgtttgccgcgatggcggaagtggaacagattgggttgacggcaaggtttgtcaaa
ccgatcaaagattttgttttgttgatccgcaatttatccacgcagcagcaatatctttcc
gtaacggaactgacagaagaagttctcaaactgagcggttatcggaccgagttgatggcg
gaaaaaacgatcgaagcggaaagccgactggagaacttgaacgaatttctgtctgttaca
caggaatttgaaaaacggtatccgggagaaggtctgctcacgtttctgtcggaggtcgca
ttggtggcggatgtggatcagatggaagccgattcggacgctgtcactttaatgacgttg
cactccgccaaagggttggagtttccggttgtgtttctggcaggcatggaggaaggcgta
tttcctcatatgcgatcattggatgatccggacgaaatggaagaggagcggcgtatctgc
tatgtgggaatcacaagagcggaggaaagattgtatctgaccacctgttttagccgcaca
ttgttcgggcagacgaggatgaatgcagaatcccgatttttgaaagagataccggaagag
ctgttgaacgaaagcggctatgcgaaccgaacggcaggaaacgttacaagaacaccgcgc
aatggaaatatcggcacacatattccaaaagggttcggtgcggacctgtcagtctcctgg
cagacaggtgaaaaagtgatgcacaaaacgtggggacagggaaccatcgtggaaagctcc
ggtgagggagaagatttggagctgaccgttcagttcgccccgccgactggcatccgtaaa
ctgttggccaaatttgcgccgattacaaagctaagagaatag
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