Effusibacillus dendaii: skT53_24220
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Entry
skT53_24220 CDS
T06872
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
eff
Effusibacillus dendaii
Pathway
eff03030
DNA replication
eff03430
Mismatch repair
eff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
skT53_24220 (holB)
03430 Mismatch repair
skT53_24220 (holB)
03440 Homologous recombination
skT53_24220 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eff03032
]
skT53_24220 (holB)
03400 DNA repair and recombination proteins [BR:
eff03400
]
skT53_24220 (holB)
Enzymes [BR:
eff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
skT53_24220 (holB)
DNA replication proteins [BR:
eff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
skT53_24220 (holB)
DNA repair and recombination proteins [BR:
eff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
skT53_24220 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
BCJ87437
UniProt:
A0A7I8DBS3
LinkDB
All DBs
Position
complement(2311623..2312588)
Genome browser
AA seq
321 aa
AA seq
DB search
MESFSIQLLKQILTSGRLAHAYLFTGPDEMGMKAAALYFAKGIFCMAQNLERPCGQCSNC
RRIENGNYPDLVVLEPDGPSIKIQQVREIQKSFALKAMEGNRKVYIITRADLMTVEAANA
LLKFLEEPSTPITAILLSNRKESMLPTIVSRCQFVPFFRMPVETIQQILQAEGISVGKAK
LAASIRQTVDSAKQLTAYDRFAEIANLVIQLTEEIHLKRGNPLFLIQDKIIKPDWSPEDV
ETFLDCLAWWYRDLLLAKLDITDGLVYENQHTRIQSQAALYDSEHLAQMVEVVLLAKKRL
QSQANRQLMLERMVLQLQGEF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgttttcgatccaattgttaaagcaaattttgaccagcggtcgtttggctcat
gcgtatctgttcacaggtcccgatgagatgggcatgaaagcggccgccctttattttgca
aagggaattttttgtatggcgcaaaatttggaacgcccctgcggacaatgcagcaattgc
cgaagaatcgaaaacggcaactatccggaccttgtggttcttgaaccggatggaccatcg
attaaaatccaacaggttcgcgagattcagaaatcgtttgctttaaaagcgatggaagga
aaccgcaaggtgtatatcataacgagagccgacttgatgacggtagaagcggccaatgcg
ctgttgaaatttctggaggagccgagcactccgataactgccattttgctgtcgaaccga
aaggaaagcatgctccccacgattgtttcccgttgtcaatttgtcccctttttccgcatg
ccagttgaaaccatacaacaaatattacaggcggagggaatatctgtcggtaaggcaaaa
ttggccgcaagcataaggcaaacggttgactctgccaaacagttgaccgcctatgatcga
tttgcggaaatagcaaatctggtgatacaattaacagaagaaattcatttaaaaaggggc
aatcctctttttctgatacaggataaaatcatcaagcccgactggagtccggaagatgtg
gaaacattccttgattgcctggcttggtggtatcgagatctgttgcttgcgaaactggac
ataacagacgggttggtatatgaaaaccaacacacccgtattcagtctcaagcagcgttg
tatgattcggaacatttggcgcagatggtagaggttgtcctgttggccaaaaaacgttta
caatcccaagcgaaccggcagttgatgttggaacgtatggtattgcagctgcagggggaa
ttttag
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