Effusibacillus dendaii: skT53_31320
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Entry
skT53_31320 CDS
T06872
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
eff
Effusibacillus dendaii
Pathway
eff03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
skT53_31320 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eff03400
]
skT53_31320 (ku)
DNA repair and recombination proteins [BR:
eff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
skT53_31320 (ku)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF3150
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
BCJ88147
UniProt:
A0A7I8DDP9
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All DBs
Position
complement(3015075..3015944)
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AA seq
289 aa
AA seq
DB search
MRSMWKGSISFGLVNIPVSLFKATEDHSTSFRNLHEYCKHPIQYKKWCPVCDREVEAKEI
IRGYEYAPGNYVLITDEDLDQLPLPTLKTIEILHFTDKDSIDPIFYEKAYYLGPGEYGAK
PYKLLYEAMRQTNKAAVAKVAFRTSEHLAVIRLHQHALVMSMIHYPAEVRAVSEVPGIEN
LTGMEVSENELQMAVRLIEEISSQFRTDYQSNYEAALKELIAAKVQNAEIDQPQAAPASN
VVDLMEALKRSLAATDKETKTAASDRRAQNPKAVETDEQPKRRRRKVTS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcgatgtggaaagggagcatcagtttcgggctggtaaacattccggtcagtctg
ttcaaagcaacggaagatcattccacaagcttccgcaatcttcatgaatactgcaaacat
ccaatacaatataaaaaatggtgccccgtatgtgaccgcgaggtggaagcaaaggagatc
atccgcggctatgagtacgcaccgggcaactatgttcttataacggatgaggatcttgac
cagcttcctctgccgactttaaaaacgatcgagattctccattttacggacaaggacagc
attgaccctattttttatgaaaaggcctactatttgggacctggcgaatatggcgcaaaa
ccctacaagctgctgtatgaggcgatgcggcaaaccaacaaggcagcggttgccaaagtg
gcttttcgaaccagcgagcacctggccgttattcgcctgcatcaacatgcgctggtcatg
agcatgatccattacccggcggaagtacgcgcggtcagtgaggtcccgggaattgaaaat
ctgacagggatggaggtcagtgaaaacgaactgcagatggccgtccgtttgattgaggaa
atcagcagtcagttccgcactgattatcaaagcaattatgaagccgcattaaaggaattg
atcgcagcaaaagttcaaaatgcggaaatagaccagccacaagccgcgcccgccagcaac
gtagtggatttgatggaagcattaaagcggagcttagccgcaacggataaggaaacaaag
acagcagcttccgaccgtagagctcaaaatccgaaggcggttgaaacggacgagcaaccc
aaacggaggcggcggaaagtcaccagctaa
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