Candidatus Endolissoclinum faulkneri L5: P856_528
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Entry
P856_528 CDS
T04221
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
efk
Candidatus Endolissoclinum faulkneri L5
Pathway
efk03030
DNA replication
efk03430
Mismatch repair
efk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P856_528 (dnaE)
03430 Mismatch repair
P856_528 (dnaE)
03440 Homologous recombination
P856_528 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efk03032
]
P856_528 (dnaE)
03400 DNA repair and recombination proteins [BR:
efk03400
]
P856_528 (dnaE)
Enzymes [BR:
efk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P856_528 (dnaE)
DNA replication proteins [BR:
efk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P856_528 (dnaE)
DNA repair and recombination proteins [BR:
efk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P856_528 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
GHMP_kinases_N
Motif
Other DBs
NCBI-ProteinID:
AHC73744
UniProt:
V9TS75
LinkDB
All DBs
Position
876224..879742
Genome browser
AA seq
1172 aa
AA seq
DB search
MSYAQFIHLRVHSAYSMAEGAIHVNEIVRLAKQNAMPAVAITDSSNMFGALEFAVTASNE
GVQPIVGVQLNISPTIDTKLPGTYGVSNSKLPDQLPLIAQNETGYMNLINLVSQAFLDTT
ENEAPLISLDNMEGRTDGLIALTGGLKGSLGRLLLTKGGKIEANTMLRRLEELFPNRLYI
ELQRHFLEEELQIENSLINLAYAHNLPLVATNDVFFADLDMHEPQDVLLCIAQGTTISNL
NRWRVTPHHRFKTAEEMHRLFADLPEAINNTLVIARRCAVMPEKTAPILPSFETQDGRTE
AEELRIKANEGLENRLNFYVYNKEMNATTREKTAIPYRKRLDMELAIIEQMGFSGYFLIV
SDFIKWAKTKKIPVGPGRGSGASSLVAYSLLITDLNPLRWGLLFERFLNPERVSMPDFDI
DFCQDRRDEVIHYVQKKYGRECVAQIITFGKLQARAALRDVGRVLEIPYSQVNRICKLVP
NNPNNPVTLKQAVQNEKELQVQSAADKNVANLIKIALKLEGLYRNASTHAAGIVIGNKSL
NNLVPLYRDPRSNMLVTQFNMKWIEQAGLVKFDFLGLKTLTVLKLAVDLLKERGLEIDLS
KISLSDEQTYSMLTKGDSIGVFQLESSGMRDVLRRMRPDRFEDIVALVALYRPGPMANIE
KYIACKHGEEQVDYMHPILEPVLKETFGIMIYQEQVQQAAQLLSGYTLGTADLLRRAMGK
KIKKEMDAQRDKFIRGAAANGVSKNQSNCIFDQIAAFAGYGFNKSHAVAYAMISYQTSYL
KANYPVEFLAASMTYEMNNTDKLNVLRQELNNLNIKLLPPDINKSGQNFSVEKLENDNYG
IRYALTAIKNVGISAMSLLVSSRDKTGPFKSIIDFVDRINPNQVNKRLIENLIRAGTFDE
LHNNRAELFENINTIMLRLNIAASERNSEQISLFNLAKDSALQKQILPKRRPDWTSIDRL
RAEFDALGFYLSANPLDSYAQNLVKMKVIASSEAYSETLSKNGKTELMMVGIVIGKQIRT
SKFGKHFAVIQFTDSKGVFELTMFSKLFATSQDLLESGDPLLIRANARIKDNNLQLSASS
IELLNQAIDRVASGIEIFLSNGSSLEQIKQLIEKEVNGFGRIYIIIQTSRGNVRIKLPDN
YQPSSSLREAIKDMPGIKYITNLSSIYVDPQH
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgctcaatttattcatcttcgtgtgcattcagcgtattctatggctgaagga
gcaattcatgtcaatgagattgtaaggctcgccaagcaaaatgcgatgccagctgtcgcc
ataactgatagcagcaacatgtttggagcgttggaatttgctgttacagcttccaacgaa
ggcgtacagcccatagtaggagtacagcttaacattagcccgacaatcgatacgaaatta
ccgggcacgtatggagttagcaatagtaagctgccggatcaactaccgctgattgctcaa
aacgaaacgggctacatgaatttgattaatcttgtaagtcaagcttttctcgatactaca
gaaaatgaagctcctctaatttccctagataacatggagggacgtaccgatggtctgatt
gcactaactgggggtctgaaaggtagtttgggtcgtttactattgactaaaggcggtaaa
atcgaagcgaatactatgctcagacgtttagaggaacttttccccaatagactttatatc
gaactacagcgccactttcttgaagaagaactccaaatagaaaattctctgattaattta
gcatatgctcacaatctacctctggtagctaccaacgatgtattctttgcagatctagat
atgcatgaaccacaagacgtgcttctttgtatagcacaaggcacaacaattagcaattta
aaccgctggcgagttactccacatcatcgattcaaaaccgctgaagagatgcatagactg
tttgcagatttgccagaagcaattaacaacactctagtaatcgcaagacgttgcgcggta
atgccggaaaagactgcacccatactaccaagctttgagacgcaagatggtagaactgaa
gccgaagaattgcgaataaaagctaatgaaggtctagaaaaccgtttaaacttttatgtt
tataataaggagatgaatgctactactcgagaaaaaactgcaattccctaccgcaaacga
ctcgatatggagttagcgattatcgaacagatgggattctcgggatattttcttatcgta
tcggacttcataaaatgggctaagacaaaaaagattccggttggtccaggacgcggatca
ggcgcaagttcacttgttgcttattctttattaattaccgacttaaatccgctacgctgg
ggattactatttgagcgctttcttaacccagagcgcgtatcaatgccagactttgatata
gacttttgccaagatcgccgtgatgaggtaatccattacgtgcaaaaaaaatatggccga
gaatgtgtcgctcaaattatcacttttgggaaacttcaagctcgtgccgctctgcgcgac
gtcggtcgtgtacttgaaattccctacagccaggtaaacaggatttgcaaattggtgccg
aacaaccctaataatccagtaaccttgaaacaagcagttcaaaatgaaaaagagctccaa
gtgcaaagtgcagccgataaaaatgtcgccaacttgatcaagattgctctaaagttggaa
ggactatatcgcaatgcatctacgcatgctgctggcatagtaataggtaataagtcatta
aacaatctagtacctctctatcgtgacccgcgctcaaatatgttagtcactcaatttaac
atgaaatggatagagcaggctggacttgtaaaatttgattttttaggcttgaagactcta
accgtactcaagttagccgttgacctattaaaagaacgaggactagaaatagatctatct
aagatttctcttagcgacgagcaaacttattccatgctaaccaagggcgatagtattggt
gtatttcagttagaaagttcaggaatgcgtgatgtattgcgacgcatgcgtcctgataga
tttgaagatatcgttgcgctagttgcattgtatcgccctggaccgatggcaaacatagaa
aaatacatcgcatgtaagcatggcgaagaacaggtagattacatgcatcctattttggag
ccagttcttaaggaaacttttggtataatgatttaccaagagcaagtgcagcaagctgct
cagctactctctggctataccctcggtactgcagacctgctacgccgagctatgggtaaa
aaaattaagaaggaaatggatgcccaacgtgataaatttattaggggagcagctgcaaat
ggagtaagcaaaaatcaatctaattgtatttttgatcaaatcgctgcttttgcaggatat
ggctttaacaaatctcacgccgtggcctatgctatgattagttaccaaacatcttatcta
aaagctaattatccagttgagtttctagcagcatcaatgacctatgaaatgaacaataca
gataaactaaatgtattgcgtcaagaattaaacaatcttaatatcaaactactacctcca
gacattaataaatcaggtcagaatttttcagtcgaaaagcttgaaaatgataactacggt
attcgctatgctcttactgcaataaaaaatgttggcatttcagcgatgagcttactagtc
tcttcacgagataaaaccgggccgtttaaaagtataatagattttgttgatcgtattaac
cccaatcaagtaaacaagcgtctgatcgaaaatttaattcgtgccgggactttcgatgaa
ttacacaacaatcgtgcagaattatttgaaaatattaatacaattatgcttcgcctgaac
atagcggcaagtgagcgaaactctgagcaaataagtctttttaatctcgcaaaagattcg
gcattacaaaaacaaatcttacctaaaaggagaccagactggacaagtatagatcgcctg
cgtgcggaatttgatgcacttggattttacctctcagccaatccgttagactcctatgca
caaaatttagttaaaatgaaggttatcgcttctagcgaagcatattccgaaaccctatct
aagaacggaaaaacagaactgatgatggttggaatagtcattggtaaacaaatccgcact
tctaagtttggcaaacattttgcagttatacaatttactgatagtaaaggtgtatttgag
ttaaccatgttttcaaaactatttgctacatcacaggatttattagaatcaggagaccca
ctcctgattcgtgctaacgcaagaattaaagacaacaacttacaattatcagcctcatca
atagaattactaaaccaggcgatcgatcgggtagcatccgggatagaaatttttctcagc
aatggttcatctctagaacaaattaaacagttgatagaaaaagaagtaaacggatttggc
cgtatttatattattatccaaactagtcgcggtaacgtccgcatcaaactaccagacaat
tatcaaccttccagtagtttgcgtgaagctattaaagatatgccaggtatcaaatatata
acgaatctttcctcgatttatgtcgatcctcagcactaa
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