Candidatus Endolissoclinum faulkneri L5: P856_67
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Entry
P856_67 CDS
T04221
Symbol
uvrD
Name
(GenBank) excision endonuclease subunit UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
efk
Candidatus Endolissoclinum faulkneri L5
Pathway
efk03420
Nucleotide excision repair
efk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P856_67 (uvrD)
03430 Mismatch repair
P856_67 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efk03400
]
P856_67 (uvrD)
Enzymes [BR:
efk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P856_67 (uvrD)
DNA repair and recombination proteins [BR:
efk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P856_67 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
P856_67 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
BpsA_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AHC73314
UniProt:
V9TR06
LinkDB
All DBs
Position
97464..99752
Genome browser
AA seq
762 aa
AA seq
DB search
MFAQYSYLDGLNDDQLVAVKALDGPVLILAGAGTGKTRVLASRLTHILTVGNVDPRNILA
VTFTNKAAQEMKERVNAVVGSATKQICLGTFHALCAKILRNHAELVGLKSNFSILNINQQ
ITLIKQILQDLNIEEKHCSAQSVLGILQRWKDRGLTSDKIYSTKFSNISVGNPKQIYRHY
QDRLINMNAVDFGDLILHCFTLFQTNVCVLQQYQNQFRYIMVDEYQDTNLVQYFWLRLLA
QNYKNICCVGDDDQSVYGWRGAEIGNIINFENDFPGSKVVRLEQNYRSTSRILAVASSVI
ARNKGRLGKILWTKGNDGEQIIVRCVSDNYMEARVICERIKYYHKTNVPLRGIAVLVRTG
FQIRAFEEQLVTLGVPYKTIGAARFYDSKEIRDVISYLQVIAQPKNDLAFERIINVPARR
IGKTTERILFQYARINNICLTTAAEHIVQDEVLKPPARQAVSLLMQNFARWRKASHNDSL
STLTNKVINESGYIASLQKDGSQEALERLNNINELITTLEKFISLDNFLEHISLFAEGVD
SVNFEQVSLMTLHAAKGLEFEVVFLPGWEEGIFPNQRAIDEKSVSALEEERRLAYVGLTR
ARKHVEIFFATNRHLHGVWRNAIPSRFISEMPVEHLAMIGNVRVYNANTIQRHCDDFKYT
HKNKFRLSSLESSRPVNNSIVHNSDYIYQNHDIVRKDNTKIKGNLCTNEISRFDKSTLEE
RVFHKKFGMGTIIKADSKGKLEVLFDCEGTKKVLDTFVSRSK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgcaatatagttatctagatggtttaaatgatgatcagcttgttgcagtaaaa
gcactagatggccctgtattgatattggctggtgctggtactggtaagactcgtgtgttg
gcaagtcgccttactcacattttgaccgtggggaatgttgacccaaggaatatcctagcg
gttacattcacaaacaaagcagcccaggaaatgaaagaacgagttaacgcagttgttggc
tctgcgacaaagcaaatctgtttagggacctttcatgcactgtgcgctaagattttacgg
aatcatgctgagctggtagggcttaaatcaaatttttctatattgaacatcaatcagcaa
atcactttaataaagcaaattctacaggatctaaatattgaagaaaagcattgttctgct
caatctgtactaggtattttacagcgttggaaagatcgtggcttgacttccgataaaata
tattccactaaatttagtaatatatccgtaggtaatccaaaacaaatctatcggcattat
caagataggttgataaatatgaatgcagttgattttggcgatcttattctgcattgcttt
accttattccaaaccaatgtttgtgtactacaacagtaccaaaatcaattccgatatata
atggtggacgaatatcaagatactaatttagttcaatatttttggttgcgtttgctggct
caaaattataaaaacatttgctgtgtaggggatgatgatcagtcggtttatggttggcgt
ggagcagaaattggcaatattattaactttgaaaacgactttcctgggtctaaagtagtc
agattagaacaaaattatcgctctacttctcgcatcttagctgtcgcctctagtgtgatt
gcgcgtaacaaaggtcgtttgggtaagattttgtggaccaaagggaatgacggcgagcaa
atcattgtgcgctgtgtgtctgataattacatggaagcaagagttatttgcgaaagaatt
aaatattatcataaaactaatgtgcctttgcgcggaatagctgtgcttgtacgtactggt
tttcagattcgcgcttttgaagagcaactagtgactcttggtgtgccttataagactatt
ggcgctgcacgtttttatgatagtaaggagatacgcgatgttatctcatatttgcaggta
atcgctcagccaaaaaatgatttagcctttgaaagaataatcaacgttccagctcgccgt
atcggtaagacgacagaacgaattttatttcaatatgctcgaataaacaacatttgtctc
acaacggctgcggagcatattgtgcaggatgaagtattaaaaccgcctgcaagacaagca
gttagcctactaatgcaaaattttgcacgctggcgcaaggcatcacataatgactcctta
tcgacactaactaacaaggtgataaacgaaagcggttatattgcctctttgcagaaggat
ggttcgcaagaagccttggaaagattgaataatataaacgagttgattactactttagaa
aagtttattagtcttgataattttttagaacatatctctttattcgcagaaggagttgat
tctgtaaactttgagcaagttagtctgatgaccttgcatgctgctaaggggctagagttt
gaagtcgtcttccttcctggttgggaggaaggaatatttcctaaccagcgagctattgat
gaaaaaagtgttagtgctttggaggaagagagacggcttgcttatgtcggtttaactaga
gcacgcaaacatgtcgagatcttttttgccacgaatcgccatctgcacggggtttggcga
aatgcaattccctcacgctttatttctgaaatgccagtagagcatttagcgatgatcggg
aatgttagggtttataatgctaatactattcagcgccattgtgatgactttaagtatact
cataagaataaatttagattatcgtccttggaaagttctaggccggtaaacaattcgata
gtccacaattcagattacatttatcaaaaccatgatattgtccgcaaagacaatacgaaa
attaaaggtaatctatgtacgaatgaaatctctagatttgataagtctactttagaagag
agagtttttcataaaaaatttggtatgggaactataataaaagccgacagcaagggcaaa
cttgaagtattgtttgattgtgaaggaactaaaaaagtcttggatacctttgtctctagg
tcaaaataa
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