Candidatus Endolissoclinum faulkneri L5: P856_680
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Entry
P856_680 CDS
T04221
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
efk
Candidatus Endolissoclinum faulkneri L5
Pathway
efk03410
Base excision repair
efk03430
Mismatch repair
efk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P856_680 (recJ)
03430 Mismatch repair
P856_680 (recJ)
03440 Homologous recombination
P856_680 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efk03400
]
P856_680 (recJ)
DNA repair and recombination proteins [BR:
efk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
P856_680 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
P856_680 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P856_680 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ThiG
Motif
Other DBs
NCBI-ProteinID:
AHC73887
UniProt:
V9TUQ9
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All DBs
Position
complement(1173623..1175416)
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AA seq
597 aa
AA seq
DB search
MSQSNAFLGVEQSLTLRRWVLNTNGKIKNVDKLGLAIAHQFALPETVGQIMAQRGIELDA
VECFLRPTLKVELPDPKRFIDMEFAVNRLVEAVLLGQIIGLFADYDVDGATSAASMTRYF
RAVGASVLIYVPDRIDEGYGPSMPALQDLVIRGAKVVVCLDCGILAIETLAQAMKARIDV
IVVDHHVAGSELPAAIAVVNPNRLDELAGFGYLAACGVTFLTLVAVNRALRDKGWFTRHA
EPDLKFILDLTALGTVCDVVPLTGLNRAFVVQGLKVMARRSNIGLAALADVAGLGPTKPT
AYHLGFVLGPRINAGGRMGKSDLGAKLLSTKNIVEARRIAKTLDYCNNKRKVIEAGLLRS
AIAQAKSARDAPLLVVSGNGWHSGVIGIIASRLKDRFYLPACVISIDEKGIGRGSGRSVP
GINLADAIIAAHRVGLLESGGGHAMAVGFTVAASRIDEFTAFLIEWFASLNICSPLMHSD
LSVDALLAPSETTVELARSISLLAPFGVGNLEPRFIVSHAKVESSGIVNNKHVKCTLVGY
HSVRIESIAFHAVGNTIGSSLLQVHKGPMHVAGYLRLNNSRGNYKVQLVIDDLAQAV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcaatccaatgcatttctaggtgttgaacaatcactgactttgcgtcgttgggta
ttgaataccaacggtaagataaaaaatgttgataagcttggtttagcgattgcgcaccaa
ttcgcccttccggaaactgtaggacaaattatggctcagcgcggcattgaattggatgca
gttgagtgttttttgcgcccaacattaaaggttgagcttccggatcctaaacgatttatt
gatatggaatttgccgttaataggttggttgaagctgttcttttaggacagattatcggg
ctgtttgcggattatgacgtagatggcgctacttcagcagccagtatgacgagatacttt
cgtgcagttggtgcatcagtgctcatttatgttcctgatcgtattgacgaaggttatggt
ccaagtatgccagcgttacaagatctagttatacggggtgctaaagtagtggtttgcttg
gattgtggcattctcgctatcgaaactctggctcaggcaatgaaggctaggatagatgta
attgttgtcgatcatcatgtagctggttcagaattaccagctgctatagcggttgttaat
cctaatcggttagatgaattagcaggatttggctatttggcggcatgtggtgttactttt
ctgacgctagtagctgttaatcgtgcattacgagataagggttggtttactaggcatgct
gagcctgatctaaaatttattcttgatttgactgctctgggaactgtttgtgacgttgtg
cctcttactggactcaaccgggcttttgttgttcaaggcttgaaggttatggcaagacgc
tcgaatatcggattagcagccttagcggatgttgctggacttggtcctactaagccaact
gcttatcatctgggctttgttttggggccaagaattaatgctggtgggcgtatgggtaaa
tctgaccttggcgctaagttgctttctactaagaatattgttgaggctcgccgaattgct
aaaacgttggattactgtaataataaacgtaaagtaattgaagcaggacttttgagaagt
gctattgctcaagcgaaaagcgctagagatgcaccactgcttgtggtgtcgggaaatgga
tggcattctggcgtgatcggcattattgctagtcgcttaaaagatcgattttatcttcct
gcttgtgtgattagtatcgacgaaaaaggtattggaaggggctctggtcgctcggtgcct
ggtataaatttggcagatgcaattattgctgctcatcgggttggattattagaaagcggt
ggtggccatgctatggctgtaggctttactgttgctgcaagtcgtatcgatgaatttacc
gctttcctgatcgagtggtttgcttcacttaacatttgctcacctttgatgcattctgat
ctgtccgtggatgcgcttttagcgccaagtgaaactacggtggaattggctcgttctata
tcattacttgcgccatttggcgttggtaatttggagccgcgttttatagtttctcatgct
aaggttgaatcaagcggtatagttaacaataaacatgtaaagtgtactttggtaggatat
cattctgttcgaatagaatctattgctttccatgctgttggcaatactattggttctagc
ttgttgcaagtacataaaggccctatgcatgtagcaggctatttaaggctgaataattct
cgtggtaattataaagtgcagcttgtaatagatgaccttgctcaggcagtttaa
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integrated database retrieval system
