Candidatus Endolissoclinum faulkneri L5: P856_688
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Entry
P856_688 CDS
T04221
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
efk
Candidatus Endolissoclinum faulkneri L5
Brite
KEGG Orthology (KO) [BR:
efk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efk03016
]
P856_688 (rnd)
Enzymes [BR:
efk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
P856_688 (rnd)
Transfer RNA biogenesis [BR:
efk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
P856_688 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHC73895
UniProt:
V9TX33
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All DBs
Position
1194627..1195787
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AA seq
386 aa
AA seq
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MNLINDTQTLSAVCNRIAEEPYVAIDTEFLRNKTYYSKLCLVQLAGEHDVVAVDILAPDI
NPMPLFDLMANHNVLKVFHAARQDTEIFVHMTNQVPVPMFDTQVAGMVCGLGNAVSYDRM
VRVITGVILDKSYRFTDWSQRPLSTQQIDYALGDVIHLRPCYECLSNRLIKTNRLKWLEE
EMAILTDISTYIIKPEECWKRIKTRSNKQNFLVVLRALAAWRELKAQKSDIPRNYILKDD
ALVYIASQLPTSSTELSCSQFFNRKSLNNRMIKEILEVIKIALESPKNTWPKAIPNQGKA
QERQPIVEMLQVLLKLQCKKYNVAPKLVANANDLDAIAAEDTADLPAMKGWRREIFGKVA
LAVKQGKLAFAFDTINNRLTLIKVPK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttatcaacgatacgcaaaccttatcagcagtttgcaaccgcattgcagaagag
ccttatgttgcaatagatacagaattcctcagaaacaaaacatattattctaaactttgt
ttagttcaacttgctggcgaacatgatgtcgttgcagtcgatatcctggcacctgatata
aacccaatgccactttttgatctgatggctaatcataatgtgcttaaagtttttcacgcg
gctcgtcaagatactgagatattcgtacatatgactaatcaggtcccagtgccaatgttc
gatactcaggttgctggaatggtgtgtggccttggtaacgctgtgagttacgatcgcatg
gtgcgagtaataactggagtaatcttagacaaatcctatcgtttcactgactggagtcaa
aggccattgtcaacccaacaaatcgattatgcgctaggcgatgtaatccatctccgtcct
tgctacgaatgcttatcgaatcggctaattaaaactaatcgcttaaaatggcttgaagaa
gagatggcaatactaactgatatttcgacttacattataaaaccagaagagtgctggaaa
agaataaaaacccgctccaataaacaaaactttcttgttgtactacgcgccttagctgca
tggcgagaattgaaagctcaaaaaagcgatattcctcggaattatatcctgaaagacgat
gcattagtatacattgcttcgcaattaccaacttctagcaccgaattgtcgtgctctcaa
tttttcaatcgcaaatccctcaataacagaatgattaaggaaatactggaggttataaaa
atagccctagaatcaccgaagaacacctggcctaaggcaattcctaatcaaggtaaagca
caagagcgtcaaccaatagttgaaatgttacaagtcctactaaaattacagtgcaaaaag
tacaacgtagccccaaagctagtagctaacgctaacgatctagatgctatagcggctgaa
gatactgcagatttacctgctatgaaaggctggcgtagagaaatattcggtaaagtagcc
ttggcagttaagcaaggcaagctcgcatttgccttcgacacaataaataatcgactgaca
ctgatcaaagttcctaaataa
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