Candidatus Endolissoclinum faulkneri L5: P856_776
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Entry
P856_776 CDS
T04221
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
efk
Candidatus Endolissoclinum faulkneri L5
Brite
KEGG Orthology (KO) [BR:
efk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efk03032
]
P856_776 (topA)
03400 DNA repair and recombination proteins [BR:
efk03400
]
P856_776 (topA)
Enzymes [BR:
efk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
P856_776 (topA)
DNA replication proteins [BR:
efk03032
]
Prokaryotic type
DNA Topoisomerases
P856_776 (topA)
DNA repair and recombination proteins [BR:
efk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P856_776 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AHC73977
UniProt:
V9TUY8
LinkDB
All DBs
Position
1373129..1375687
Genome browser
AA seq
852 aa
AA seq
DB search
MSKIVVVESPAKAKTINNYLGKEYYVLASYGHICDLPPKKGSVNPEHDFQMIWQTDQRSE
KQIKTIADAVKGAKQLILATDPDREGEAISWHICNELDARKVLDGVKVQRVAFNAITKEA
VMNAIANPRSLNQDLINAYRARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCE
RNSEIEKFVAKEYWSLKATFLTKENDTFTALLTNLNGNIIQRLDIKSEDEANAAMAIVER
GIFLIDSVEKKLVKRNPTTPFTTSTLQQEASNQLGFRTRRTMQVAQSLYDGVNIAGETTG
LLTYIRTDAIHIAPEAITQIRETIRFEYGERYLPNTPIIYKSKVKNAQEAHEAIRPTDIT
LTPDMLHAYLNHDQWKLYSLIWKRAVASQMASAELSQTTIDVIDKDKLTILRATNSVFTF
DGFLKLYRENCESNKVANQIDNEHNKSLPTVSNGDIVIQQNVILTQHFTQPPAHYSEASL
VKKMEDLGIGRPSTYANILQVLHDREYVRFDGRRFMPEDRGRLVITFLSSFFKRYVEYGF
TADLENQLDNISDGQMDWRQVLGEFWKTFKCLVDDINKLSISEVLERLDDALADYFFPDT
NKRNENRKCRNCSEGTLSLRLGKFGAFIGCSNYPICKFTKQISEGITSKSIEEEKEANTL
PRVLGCDPETGKNVSINNGPYGVYVQLDQGEQESKEKPKRTPLPKQISLTDIDLDTALGL
LSLPRLICEHPETKDIIQAGISRFGPYLKYGIHYVKLPSDHTVLTIGIKQAIQLISENIS
KTKIRRVLGHHPDDGKPVIIQTGRFGLYAKHGSLRASLSKKEEIDKLTLKKVIDLLNSKG
KNIHKSKCKKYR
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatagttgtcgttgagtctccagctaaagctaaaactatcaacaattatctg
ggtaaagaatattatgtgttagcgagttacggccacatttgcgacctacctcccaaaaaa
ggctcagtgaatccagaacatgactttcagatgatttggcaaactgatcagcgttctgaa
aaacaaataaaaacgattgccgacgccgtgaaaggagcaaagcaactcatcttagcaact
gacccagatcgagaaggtgaagctataagctggcacatctgcaatgaattggatgcccgc
aaggtacttgatggggtaaaagttcaacgagttgcattcaatgcaatcactaaagaagca
gttatgaatgctatagccaatccacgcagcttaaaccaagatttaattaacgcatatcga
gcacgacgagctttagactatttagttggatttaccttatcaccagtactatggcgcaaa
ctacccggtgctcgatcagctggacgtgtacagtctgtcgctttacggcttgtttgtgag
cgcaattcagaaatcgagaaatttgtagctaaagaatattggtcacttaaggcaacattt
cttactaaagaaaatgatacattcaccgcactattaaccaatttaaatggcaatatcata
caacgacttgacataaaatcagaagatgaagccaacgctgcaatggctattgtagagaga
ggaatattccttatagactctgtagaaaaaaaacttgtcaagcgtaatccaaccacgcct
tttactacttctactctacagcaagaagcttcaaaccaacttggatttcgtaccaggcgt
actatgcaagttgctcaatctctttatgatggtgtgaatatcgccggcgagactactggt
cttcttacttacataagaaccgatgctatacacatagcgccggaagcgataacacaaatt
cgtgaaactattaggtttgaatatggcgaacgctatctacccaatacaccaataatttat
aaaagtaaagtgaaaaacgcccaagaggcgcacgaagcaatccgaccaaccgacattaca
cttacaccagatatgctgcacgcatatctaaatcacgatcaatggaaactgtattcgcta
atctggaaacgagctgtagcgagccaaatggccagcgcagaactaagccagactacaata
gacgtgatagataaagataagctcactattctgcgcgctactaattcggttttcacattt
gatggttttcttaaactctatcgagaaaactgcgaatcgaataaggtagcaaatcaaatc
gataacgaacacaataaatccctacctaccgttagcaacggcgacatcgttattcaacaa
aacgtaatcctgacacaacacttcacacaaccgccagcgcactattcagaagcaagcctt
gtaaaaaaaatggaggatcttggaatcggcagaccgtccacctacgcaaatatcttgcaa
gtactgcatgatcgtgaatatgttcgctttgatggtcgacgctttatgccagaagatcgt
ggccgtctagtcataacctttctttccagttttttcaagcgttacgttgaatatggcttt
actgccgatttagaaaatcagcttgacaatatatctgacggtcagatggattggcgccaa
gtattgggcgaattctggaaaacatttaagtgtttagtcgatgatatcaataaactatct
attagtgaagtgcttgaaaggctggatgatgctctagcagattattttttccctgatact
aacaaaagaaacgaaaatcgcaaatgtcgaaactgcagtgagggaaccctatctctgagg
cttggcaaatttggtgcatttattggatgttctaattatccgatatgcaagtttacaaaa
caaattagtgaaggcattacaagcaagtcgattgaagaggaaaaggaagctaatactctt
cctcgagtacttggctgcgacccggaaacaggtaaaaatgttagtataaacaacggtcca
tatggcgtatatgtacaactagatcaaggagaacaagaatcaaaagaaaaacctaaacgt
actcccttaccaaaacaaatctcactaaccgatatcgatttggataccgctctaggtttg
ttatcactacctcgattaatctgcgagcatccagaaactaaagacattattcaagcggga
attagtagattcggtccttacctcaaatatggcatacattatgtcaaactgccaagcgac
cacacagtactcacaattggtataaagcaagcaatacagctaatctctgaaaatatttct
aagacaaaaattagacgcgtgctaggtcatcacccagacgacggtaagccagtaataatc
caaaccggccggtttggattatatgcaaaacatgggtccttacgagctagtctatcaaaa
aaagaagagatagacaagctaactctaaaaaaagtgattgatttgctgaattctaaagga
aaaaatattcacaaaagtaagtgcaaaaaataccggtaa
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