Enterococcus faecium ATCC 8459 = NRRL B-2354: M7W_1612
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Entry
M7W_1612 CDS
T02454
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
efm
Enterococcus faecium ATCC 8459 = NRRL B-2354
Pathway
efm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M7W_1612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efm03019
]
M7W_1612
03400 DNA repair and recombination proteins [BR:
efm03400
]
M7W_1612
Enzymes [BR:
efm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M7W_1612
Messenger RNA biogenesis [BR:
efm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M7W_1612
DNA repair and recombination proteins [BR:
efm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M7W_1612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGE30230
LinkDB
All DBs
Position
1463210..1464613
Genome browser
AA seq
467 aa
AA seq
DB search
MLINELKKYFGFDSFRPGQEEIIQALLDGEDTLAILPTGTGKSLCYQLTGYLMEGLVIIV
SPLLSLMEDQVTQLQKRGEKRVAAFNSLLSQSERRYVLRHLSQYKFLFLSPEMLTNPSLL
EHLKKQNIALYVVDEAHCVSQWGVDFRPEYQQLGKIRKLLGNPVTLALTATATDLVARDI
RHVLFDRPPKEIRQSVNRQNISLFVRKTQQKEQELEHFMERAQGAAIIYCATKKEVERLY
HLFRERFTVGYYHGGLDAAQRRQLQQQFVKNQLQFLIATNAFGMGIDKSDIRYVVHYDLP
DSLENYVQEIGRAGRDQEESAAILFYQSGDERIHYFFNQLSREQRQSFELYLEYATEQAP
FDELQKKWMELIQQSEKPENWVERLKRQEKEKEFRLQQMLRYINEENCRRKFILAYFGEK
LSEKPQNCCDIDGAKAELLPKRKLFSKTEQLHWETILLNLFKKNMEH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgttaataaatgaattaaaaaaatattttggatttgattcatttcgtcccggccaagaa
gaaattattcaggcgttgcttgatggagaagatactctcgctattttgcctacaggaacg
ggaaaaagcctttgctatcaattgacggggtatttaatggaaggtctggtcatcatcgtg
tcaccgctgctttctctaatggaagatcaagtgacgcaattacaaaaacgaggggagaaa
cgagtagctgctttcaatagtttactttcgcaatctgaaagaagatacgtcctccgtcat
ctatcgcaatataaatttttgtttttgagtcccgaaatgttgactaatccttctctttta
gagcatctgaaaaaacaaaatattgcgttatatgtagtagatgaggctcattgcgtgtct
caatggggagttgatttccgtccagaatatcaacagttaggaaaaatccgaaagctttta
ggaaacccggtcacactggcactaacggcgacagcaacagatttagtagcaagagatata
cgtcatgtactatttgatcgaccaccaaaagagatcagacaatcagtcaatcggcaaaat
atctcgctttttgttcggaaaacgcagcaaaaagaacaagaacttgaacacttcatggaa
agagcacaaggagcggcaatcatttattgtgcaacaaaaaaagaagtcgaacgattgtat
catttattcagggaacgttttacagttggatactatcacggtggtcttgatgcagctcaa
agaagacaacttcaacagcagtttgtaaaaaatcagctgcagtttctcattgctacgaat
gcatttggtatggggatcgataaatctgatatccgttatgtggtccattatgatttgcca
gacagtctagaaaactatgtacaagaaatcggtcgagcaggcagagatcaggaagaaagt
gcagcaattcttttttatcaaagtggggatgaacgtatccattatttctttaatcaactt
tctagagaacagcgacaaagttttgagctttatttggaatatgccacagagcaagctccc
tttgatgagctgcaaaaaaaatggatggagctgatccagcagtctgaaaaaccagaaaat
tgggtggaacggctcaaacgtcaggaaaaagaaaaagaattccgcctgcagcagatgctt
cgctatattaatgaagaaaactgccgcagaaaattcatcttagcttattttggcgaaaaa
ctctccgaaaagccgcagaattgttgtgatattgatggagcaaaagcagaacttctgcca
aagaggaagcttttttctaagactgaacaacttcattgggaaacgattttactaaattta
tttaaaaaaaacatggaacattga
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