Enterococcus faecium ATCC 8459 = NRRL B-2354: M7W_2175
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Entry
M7W_2175 CDS
T02454
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
efm
Enterococcus faecium ATCC 8459 = NRRL B-2354
Pathway
efm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M7W_2175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efm03021
]
M7W_2175
03019 Messenger RNA biogenesis [BR:
efm03019
]
M7W_2175
Transcription machinery [BR:
efm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
M7W_2175
Messenger RNA biogenesis [BR:
efm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M7W_2175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
AGE30779
LinkDB
All DBs
Position
complement(2017231..2018526)
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AA seq
431 aa
AA seq
DB search
MSDYLTMAELENKTLKEVYSYAKEFKIPYYSKMNKKELSLAVIRAQAEKQGFYYMEGILD
IVGQDGYGFLRPINYGPSAEDIYISASQIRRFSLRNGDKVAGKARPPKESERYYGLMHVE
SVNGKDPEEAKERPHFPALTPLYPQRQLQLETTPQRLSTRMIDIFSPIGFGQRGLIVAPP
KAGKTSVLKEIANGITENYPEVELIVLLIDERPEEVTDLERSVKGDVVSSTFDLQPQNHT
RVSELVLERAMRLVEDKRDVVILMDSITRLARAYNLVVPPSGRTLSGGIDPAALYKPKKF
FGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNLELQLSRELSERRIFPAIDI
KKSGTRKEELLMPSEELEEIWKLRKNMTGDSLEYTEQLIRFLRKTKNNQQFFKEFQDVSF
GKKNPTRNLKR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattatttgacaatggcagaactagagaacaaaacgttaaaagaagtttatagt
tatgccaaagaatttaaaattccttattacagtaagatgaataaaaaggaattatctcta
gctgtgattcgtgcacaagcagagaaacaaggattttattatatggaaggaatattggat
atcgttggtcaagatggttacggttttttacggccaatcaattatggaccaagtgcagaa
gatatctatatttctgcctcacaaatcagacgattcagtttgagaaatggggacaaagtg
gcaggaaaagcccgtccacctaaagaatcggaacgttattatggtttgatgcacgtggaa
agcgttaatggaaaagatccggaagaagcaaaagaacgtccgcattttccagccttaaca
cctctttatccgcaaagacagcttcaactggaaacaacaccgcaaagactatctacccga
atgatcgatatcttttctccaatcggttttggtcagcgtggattgatcgtcgcaccgcca
aaagcagggaaaacttctgtattaaaagaaatcgcaaatggtatcaccgaaaactatccg
gaagtagaattaatcgttctactgattgatgaacgaccggaagaagtaacggatctagaa
cgaagcgtgaaaggcgacgtggtatcttctacatttgatctgcagccgcaaaaccatact
cgagtttctgaattagtattggaacgcgcaatgcgtttagtcgaagataaacgagatgtc
gttatcttgatggatagtattactagacttgctcgggcctataacttagtcgttccacca
agcggacgtacattgagtggcgggattgacccagccgcattgtataaacctaagaaattt
ttcggggcagcaagaaacatcgaagaaggtggcagtttgacgattttagcgaccgcttta
gtcgatacaggaagccgtatggatgacgtgatctatgaagaattcaaaggaactggaaat
ctagaattacaactttcacgtgaattatctgaacgtcggatcttcccagccatcgatatc
aaaaaatcaggtacccgaaaagaagaattattgatgccaagtgaagaattagaagaaatt
tggaaacttcgaaaaaatatgactggagattcattagaatatacggaacaactgatccgc
tttttgcgtaaaacaaaaaacaatcagcaatttttcaaagaatttcaagatgtctccttt
ggtaaaaaaaatccgaccagaaatctgaaaagataa
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