Enterococcus faecium ATCC 8459 = NRRL B-2354: M7W_2429
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Entry
M7W_2429 CDS
T02454
Name
(GenBank) RecD-like DNA helicase YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
efm
Enterococcus faecium ATCC 8459 = NRRL B-2354
Pathway
efm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M7W_2429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efm03400
]
M7W_2429
Enzymes [BR:
efm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M7W_2429
DNA repair and recombination proteins [BR:
efm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M7W_2429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
AAA_22
UvrD_C
T2SSE
AAA
AAA_12
IMS_HHH
AAA_28
HHH
CbiA
SLFN-g3_helicase
DUF6386
HTH_IclR
NTPase_1
AAA_29
WHD_TBPIP
HHH_8
NPHP3_N
nSTAND3
YjbR
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AGE31027
LinkDB
All DBs
Position
complement(2287557..2290145)
Genome browser
AA seq
862 aa
AA seq
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MQPEEMPYFVGTVAAIFFQNPSNFYKVLLVHISETTADYREKEIVVTGSFGDIQENETYR
FYGELVDHPKYGRQLKLERYEQEKPTTANGIVAYLSSEKFPGIGKKTAEKIVELLGEDAI
EKIIADPSVLKQISGLTKPKREMLAETIRLNHGMDQVIMGLNRYGFGSQLAFSIYQAYKN
ESLDIIEENPYQLVEDIEGIGFKRADNLAEQIGIAADSPRRIRAAILHQIFQHAVQTGDT
YVPAETLLQQTIRILETSRPIEIQPDQVATVIIQLVEEGKIQQEETNLYENSLYFSEWGI
GNSIQRLLSRKKEIHYPEKEVQKNIRRIEKIFGIQYGPSQEQAIAEAIRSPLFILTGGPG
TGKTTVINGIVNLFAELNGLELDPSKYTQEIFPILLAAPTGRAAKRMNETTGLPASTIHR
LLGLNGREKTPSVSTKELEGGLLIVDEMSMVDTWLANTLFKAIPTNMQVILVGDKDQLPS
VGPGQVLHDLLEIEQIPKMELNQIYRQGDGSSIIPLAHEIKEGRLPKDFTKNQKDRSYFR
SDAYQIEPLISKIVEKAKNKGFRAQDIQVLAPMYRGPAGIDALNKMMQEIFNPGKPGKKE
VHWNDTVYRIGDKVLQLVNTPELNVFNGDMGEITGIILAKDSEDKVDELVIQFDANEVTY
KRNEWNKITLSYCCSIHKSQGSEFKMVILPMVHQYQRMLQRNLLYTAVTRSKELLILLGE
EQAYVTCVANESASRMTTLKSRIMDNDKMNITLRTKLAAYEDSLVGNDPFEDGNYTKEPR
VVKEKLPVEDDSGTNETKNQVMETVEPDLFSSFVGEEKKEEVEPAVSKDFVLTAEVIDNQ
LVDPMIGMENSSPYDFIPAKNA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagaagaaatgccttatttcgttggtacagttgccgcgattttttttcaaaat
cctagtaatttttacaaagtgcttttggtacacatcagtgaaaccacagctgattaccgt
gaaaaagagattgtagtcaccggaagtttcggcgatattcaagaaaatgagacttatcgt
ttttatggagaattagtggatcatcctaaatacggaaggcagcttaaactcgaaagatat
gagcaagaaaagccaacaactgcaaatgggatcgtagcgtatctttccagcgaaaaattc
ccaggaatcgggaagaaaacagcagaaaaaattgtagaattgctgggagaagatgctatc
gaaaaaatcattgctgatccttcggtattaaaacaaatctccggtttgacgaagccaaaa
agagaaatgcttgctgagacgattcggctaaaccacgggatggatcaagtgatcatggga
ctgaatcgttacgggttcggtagtcagttagctttcagtatctaccaggcctataagaac
gagtctttggatatcatcgaagaaaatccgtaccagctagtcgaagacatagaaggaatc
gggttcaaacgtgcagataatctagccgaacaaatcggtattgcagcagattcaccgaga
agaattcgagcagctatcttgcatcagatttttcagcatgcagttcaaacaggagataca
tacgtaccggcggagacattgcttcagcaaacgatccgtattttagaaacaagtcgccca
attgaaatccagcctgatcaggttgctactgtaattatccaacttgttgaagaaggaaag
atacaacaagaagagactaatctttacgaaaacagtttgtacttttctgaatgggggatc
ggtaattcgatccagcgccttctcagtcgtaaaaaagaaatccattatcctgaaaaagaa
gtgcagaagaatattcggcgtatcgaaaaaatattcggcatacagtatggaccttcgcaa
gaacaagctatcgctgaagcaatccgttcccctctatttattttaacaggaggaccaggt
acggggaaaactactgtgatcaacggaatcgtcaatctttttgcagagttgaacggactg
gaattggatccttcaaaatatacccaagaaatttttcctattctacttgcagcaccaact
ggccgagcagctaaacgaatgaacgaaacgacaggtctgcctgccagtacgatccatcgt
cttctggggctgaatggacgggaaaaaacaccttcagtcagtacgaaagaattagaaggc
ggacttttgattgttgatgagatgtctatggtcgatacatggctggctaacacattattc
aaagcgattccgacgaatatgcaagttatcttagtaggagacaaagatcagcttccctct
gtcggtcctggtcaagtactccatgatcttttggaaatcgaacaaattcccaaaatggaa
ctcaatcagatttatcggcaaggtgatggttctagtattattcctcttgcccatgagatc
aaagaaggacgtctgccaaaagatttcacaaagaatcaaaaagatcgttcctatttccga
agtgatgcttatcaaattgaacccttgatctctaaaattgtggaaaaagcgaaaaataag
ggattccgtgcacaagatatccaagtattagcaccaatgtatcggggacctgcagggatc
gatgcgttaaataaaatgatgcaggagatattcaatccagggaaacctggaaaaaaggaa
gtacattggaacgacaccgtttatcggataggagacaaagtcctccaattagtcaatact
cccgaattgaatgtattcaatggagatatgggagaaatcacgggtatcatcttggcaaaa
gattctgaagataaagtggatgaattagttatccagtttgatgcaaatgaggtcacttat
aaaagaaacgaatggaataaaatcactctttcttattgttgctcaatccataaatcacaa
ggcagtgaattcaagatggttattttgcccatggtccatcaatatcagcggatgcttcag
cgtaatttgctctacacggcagtgactcgcagtaaggaactgttgattttgttaggggaa
gagcaagcctatgtcacttgtgtagcgaatgaatcagcaagccggatgactacgttgaaa
tcaaggatcatggataatgataaaatgaatatcactctccggaccaaactagcagcttat
gaagattctttggtcggaaatgatccatttgaagatgggaactatacaaaagagccacgg
gttgtaaaagaaaagctacctgtagaagatgacagtgggacgaatgaaacgaaaaaccaa
gtaatggaaacagtggaaccagatctgttttcttcatttgttggagaagaaaagaaagaa
gaggtagaacctgctgtttctaaagatttcgttcttacagcagaagtgatcgataaccag
ttagtagatccgatgattggtatggaaaacagttctccctacgattttataccggcaaaa
aatgcttga
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