Enterococcus faecium ATCC 8459 = NRRL B-2354: M7W_2680
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Entry
M7W_2680 CDS
T02454
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
efm
Enterococcus faecium ATCC 8459 = NRRL B-2354
Pathway
efm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
efm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M7W_2680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efm03021
]
M7W_2680
03400 DNA repair and recombination proteins [BR:
efm03400
]
M7W_2680
Enzymes [BR:
efm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M7W_2680
Transcription machinery [BR:
efm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M7W_2680
DNA repair and recombination proteins [BR:
efm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M7W_2680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
PRC
Motif
Other DBs
NCBI-ProteinID:
AGE31272
LinkDB
All DBs
Position
complement(2580685..2584338)
Genome browser
AA seq
1217 aa
AA seq
DB search
MIDVNKFESMQIGLASPEKIRSWSYGEVKKPETINYRTLKPEREGLFCERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVIEPGNTNLEKKQLLTEREYREKREQYGQEFQAAMGAEAIKQLLD
NVDLDAEAAELKEELKSAQGQKRTRAIRRLDILEAFRASGNQPSWMVMDVIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPFLKMYQCGLPKE
MAIELFKPFVMRELVQRELASNIKNAKRKIERQEDEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVQGRAIRLHPLVCEAYNADFDGDQMAVHVPLNEEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEEEGREGEGMVFRDQNEAVIAWRNGYVHLHSRIGVN
PNSLGEKPFTEWQKERTMITTVGKIIFNEIMPPEFPYLNEPTDFNLTVQTPDKYFVEAGT
DIPAHIKEQELVLPFKKKNLGNIIAEVFKRFKVTETSKMLDRMKDLGYKHSTHAGITVGI
ADISVLNEKQEIIENAHKQVETITKQFRRGLITDDERYERVIAVWNAAKDSIQQKLMEGL
EAKNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGRIMELPIISNFREGLSVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREEDCGTDRGLEIQAIREGNEIIESLE
DRLVGRYTRKEVRHPETNELIIAGNQLISEDIAKQIVDAGVETVTIRSVFTCNTKHGVCK
HCYGRNLATGSDVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQEIF
EARNPKGQAVITEVTGDVIDISEDPATRTKEVTIKGKTDTRTYTVPYTARMKVAEGDMIH
RGAPLTEGSIDPKQLLQVRDVLSVENYLLREVQRVYRMQGVEIGDKHIEVMVRQMLRKVR
VMDPGDTDILPGTLLDIADFKDQNYNTLVSGGVPATSRPVLLGITKASLETNSFLSAASF
QETTRVLTDAAIRGKKDPLLGLKENVIIGKIIPAGTGMQRYRDMEPKEVGVASENVYSIS
DIEAQMAAEDAMNNQTK
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatgtaaataaattcgaaagtatgcaaataggtttggcttctcccgaaaaaatc
agaagctggtcttacggtgaagtaaaaaaacctgagacgattaactatcgtaccttaaaa
cctgaacgcgaagggttgttctgtgagcggatttttggtcctacaaaagactgggaatgt
gcctgcggaaaatacaaacgtatccgttataaaggaatcgtttgtgatcgatgcggagtg
gaagttactcgttcgaaagttcgccgtgaacgcatgggacatattgaattagcagctcct
gtttcacatatctggtactttaaagggattccttcacgtatgggtcttgtattagacatg
agcccacgcgctttggaagaaatcatttattttgcttcatatgtagtcatcgaaccagga
aatacgaatttagagaaaaaacaattgttgacagaacgcgaatatcgcgaaaaacgtgaa
caatatggacaagaattccaagctgctatgggtgcagaagcgattaaacaattacttgat
aatgttgatctagatgcagaagcagccgaattgaaagaagaattgaaatctgcacaagga
caaaaacgtacacgtgcaatccgccgtttggatattttagaagcattccgcgcttcagga
aatcaaccaagctggatggttatggacgttatccctgttattccaccagatttacgccca
atggttcaattagaaggtggacgttttgcaacaagtgacttgaatgatctttaccgtcgt
gtaatcaaccgtaataaccgtttgaaacgtttgttagacttgaatgcacctggaatcatc
gttcaaaatgaaaaacgtatgctgcaagaagcagtagatgcattgatcgataacggtcgt
cgcggacgtccagttactggaccaggtaaccgcccattgaaatctctttctcatatgttg
aaagggaaacaaggtcgtttccgtcaaaacttgctaggtaaacgtgtcgactactcaggt
cgttccgttatcgttgttggacctttcttgaagatgtaccaatgtggacttccaaaagaa
atggccattgaattattcaaaccattcgtgatgcgtgagcttgttcaacgcgaactagct
tcaaacatcaaaaatgcgaaacgtaaaatcgaacgtcaagaagacgaagtatgggatgtt
ttagaagacgtaatcaaggaacacccagtattgctgaaccgggcacctacgcttcaccga
cttggtatccaagcattcgaaccagttttagtacaaggacgcgcaatccgtttgcatcca
cttgtatgtgaagcttataatgccgatttcgatggagaccaaatggctgtccacgttcca
ttgaatgaagaagcacaagcagaagcacgtatgttgatgttagctgctcaaaacatcttg
aaccctaaagatggtaaaccagttgttactccttctcaagatatggttctaggtaactac
tacttgacaatggaagaagaaggacgcgaaggcgaaggaatggtcttcagagatcaaaac
gaagccgttatcgcatggcgcaacggatatgttcatttacattcacgtatcggtgtgaac
cctaactcattaggtgaaaaaccatttactgaatggcaaaaagaacgtacgatgatcaca
acagttggtaagatcatcttcaacgagatcatgcctcctgaattcccttatctgaatgaa
ccaacagacttcaacttgaccgtccaaacaccggacaaatactttgttgaagctggtact
gatattcctgcacatatcaaagagcaagaattagtattaccgttcaagaagaaaaactta
ggaaacatcatcgcagaagtcttcaaacgattcaaagtaacagaaacttctaagatgctt
gaccgtatgaaagacttagggtacaaacattcgacacatgccggtatcacagtagggatc
gctgacatcagtgtactgaatgaaaaacaagaaatcattgaaaatgcccataaacaagtt
gaaactattacaaaacaattccgtcgtggtctgatcacagatgacgaacgttatgaacgt
gtcattgctgtttggaatgctgcaaaagacagcatccaacaaaaactgatggaaggtttg
gaagcgaaaaatccaatcttcatgatgtctgattctggagctcgtggtaacatttccaac
tttacacagcttgccggaatgcgtggtttgatggccgctcctaatggtcgaatcatggaa
ttgccaatcatttcgaacttccgtgaaggactatccgtcttggaaatgtttatctcaact
cacggggctcgtaaagggatgaccgatacagccttgaagactgccgattcaggttacttg
actcgtcgtctggttgacgtggcccaagatgtaatcatccgtgaagaagattgcggtact
gaccgaggtcttgaaatccaagccatccgcgagggaaatgaaatcatcgaatcattagaa
gatcgtttagtgggacgttacactcgtaaagaagtacgtcatcctgaaacaaatgaattg
atcattgcaggaaaccaattgatttccgaagacatcgcaaaacaaatcgttgatgcaggt
gtcgaaacagtgacaatccgttctgtcttcacatgtaatacaaaacatggtgtctgcaaa
cattgttacggacgcaaccttgcaactggctctgacgttgaagtcggagaagcagttggt
acgatcgccgctcaatcaatcggtgaacctggtactcagttgacgatgcgtacattccat
acaggtggggttgccggagacgatatcactcaaggtcttcctcgtgtccaagaaatcttt
gaagcacgtaatccgaaagggcaagcagtgatcacagaagtaacaggggatgtcatcgat
atctcagaagatcctgcaacacgtaccaaagaagtaacaatcaaaggaaaaacagataca
cgtacgtatactgttccttatacagcacgtatgaaagtagcagaaggcgatatgatccac
cgtggtgcaccattgacagaaggatcaatcgatccaaaacaattgttgcaagttcgcgat
gtattatctgttgaaaactacttgcttcgtgaagtacaacgtgtttaccgtatgcaaggg
gtagaaatcggcgacaagcatatcgaagtaatggttcgtcaaatgctgcgtaaagttcgt
gtaatggatccaggtgatacagatatcttaccaggtacattattagacatcgcagacttt
aaagatcaaaactacaatacgctagtctcaggaggcgttcctgcaacttctcgacctgtc
ttactaggtatcacaaaagcatcattagaaacaaatagtttcttatctgctgcatcattc
caagaaacaactcgtgtcttgacggatgctgcgatccgcggtaagaaagatcctcttctt
ggtttgaaagaaaatgttattataggtaagatcatcccagctggtactggtatgcaacgt
taccgtgacatggaaccaaaagaagtcggtgtagcaagcgaaaatgtctacagtatttca
gatattgaagcgcaaatggctgcagaagacgcaatgaacaatcaaacaaaatag
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