Enterococcus faecium ATCC 8459 = NRRL B-2354: M7W_402
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Entry
M7W_402 CDS
T02454
Name
(GenBank) Cold-shock DEAD-box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
efm
Enterococcus faecium ATCC 8459 = NRRL B-2354
Pathway
efm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M7W_402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efm03019
]
M7W_402
03009 Ribosome biogenesis [BR:
efm03009
]
M7W_402
Enzymes [BR:
efm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M7W_402
Messenger RNA biogenesis [BR:
efm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M7W_402
Ribosome biogenesis [BR:
efm03009
]
Prokaryotic type
rRNA helicases
M7W_402
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DeaD_dimer
Motif
Other DBs
NCBI-ProteinID:
AGE29049
LinkDB
All DBs
Position
177226..178737
Genome browser
AA seq
503 aa
AA seq
DB search
MKFKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPML
EKIDPDRQELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRP
HIVVGTPGRMLDHINRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQRQTLLF
SATMPPAIKNIGVKFMKNPHHVKIKAKEMTADLIDQYYVRAKEYEKFDIMTRLFDVQTPE
LTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKK
RMTTLRPPTEKEAFKGQLGAAVEQIETKLAENGLDKYLQTADKLLEEYSAQDLVALLLKT
TAKDPADAVPVKITPERPLPMQKKGYNKNGKRGGGNNRNRRDGGNYRGNKSKGGYSKNNN
SQKDGGKRHNDKKRGFVIRSNND
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaaagaactagaattatcaccagaattgttgaaatcagtcgaacgcgctggt
tttgaagaagcaacacctatccaatcagaaacgattccactagcattagctggaaaagac
gttattggacaagcacagacaggtacagggaaaacagctgcatttggattaccaatgtta
gaaaaaatcgatccagatcgtcaagaattacaaggtttagttatcgcaccaacacgtgag
ttagctatccaaacacaagaagaattatatcgtttagggcgcgacaaaaaagtacgtgta
caagccgtttacggcggagcagatattggccgtcagatccgtggcttgaaagatcgtcca
catatcgttgtgggtacaccaggacgtatgcttgaccacatcaaccgccacacattgaaa
cttggaaccgttcaaacattagttttggatgaagcagatgaaatgttgaatatgggcttc
ttggaagatatcgaaaaaatcatttcacaagttcctgatcaaagacaaacattacttttc
tcagcaacgatgccgccagctatcaagaatattggcgttaaattcatgaaaaatccacat
catgtgaagatcaaagcgaaagaaatgacagctgacttgatcgatcaatactatgtccgc
gcaaaagaatacgaaaaattcgatatcatgactcgcttgtttgatgttcaaacacctgaa
ctaacaatcgtcttcggacgtacaaaacgccgtgtagacgaattggcacgcggattagaa
gcacgcggttaccgtgcagaaggaatccatggcgatttgtctcaacaaaaacgaatgagc
gtattgcgttcatttaagagcggtcatttagatatccttgtagcgacagacgttgctgca
cgtggattagatatttcaggtgtcactcatgtgtacaactatgatatccctcaagatcca
gaaagctacgttcaccgtatcggacgtacaggccgtgccggaaaaggcggtatgtctgtg
actttcgttacaccaaatgaaatggactacttgcatgtgattgaaaacttgacgaaaaaa
cggatgacgactttacgtccaccaaccgaaaaagaagcattcaaaggtcaattaggtgct
gcagttgaacaaatcgaaacaaaacttgcagaaaatggtctagataaatacctgcaaaca
gcagataaattattagaagaatattctgcacaagatttagttgcacttttgctaaaaacg
acagcaaaagatccagctgatgcagtgccagtgaagatcacaccagaacgcccattgcca
atgcagaaaaaaggatacaataaaaatggcaaacgtggtggcggaaacaaccgtaatcgt
cgtgacggcggtaattatcgtggaaacaaatcaaaaggcggttatagcaaaaataataac
agccaaaaagatggcggtaaacgtcacaacgataaaaaacgcggatttgtaatccgttca
aataacgattaa
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