Enterococcus faecalis DENG1: DENG_00988
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Entry
DENG_00988 CDS
T03043
Symbol
uvrD
Name
(GenBank) Helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
efn
Enterococcus faecalis DENG1
Pathway
efn03420
Nucleotide excision repair
efn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DENG_00988 (uvrD)
03430 Mismatch repair
DENG_00988 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efn03400
]
DENG_00988 (uvrD)
Enzymes [BR:
efn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DENG_00988 (uvrD)
DNA repair and recombination proteins [BR:
efn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DENG_00988 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
DENG_00988 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
AAA_19
UvrD_C
UvrD_C_2
AAA_16
AAA_30
AAA_11
PhoH
AAA_12
SSF
Motif
Other DBs
NCBI-ProteinID:
AHI40022
LinkDB
All DBs
Position
complement(870941..873139)
Genome browser
AA seq
732 aa
AA seq
DB search
MTDEKFYEQQHLTTVYHELQAAKKVYEEQLANTMKDGKHMLEEFGRDSKLNFDSYADNLE
TFAMLEMKNREIDQWNLKNEATAKNLDKVKRLLQVPYFGKIGVTFEDSPEEPENFYIGVN
DFTSLEEETRIHDWRSPIASLFYDNVLGKTAYMAHQQTIPVQLDLKRQLIIEKDQLINYF
DTTIAIQDDVLLHSLEEDASPYMKDITTTIQQEQNQIIRDETQPLLLVNGIAGSGKTSAI
MQRIAYLLYQHRAEITADNILLLSPNSTFIDYISQVLPNLGERNPLNLTLLQFLRFTTKE
AWPMEEETDYFERITRSEATEQEHVIRSKEFATFLLSNPEKAVVQPHFFRPLTFKKQTLF
TSETIFKLYQETPADLSIRQRISATKEKLTSLWTRYLLKQAHSKKMLDQFQDLTEAEQVR
YFGTVITEDNEKHLADFALKRLKKKYRSITAAIKNDAWLDQWAFFETFYSLFTEKSYQKE
TAVFTADEIVALILVKHAFIENLANQQMAFILVDEVQDYTEAQLLLLLTLFPKASFTLAG
DENQAIFNTAIEFSEAHDLLVNETSRSVGTYQLLNSYRSSKEITRLFQTLGTQPEQLTIV
PIRHDGEKPTFIPCDSASDYLKAIVTSIATFDPKESTAIITKTFAEKEQLTKELSASLSL
EEHPSLQVLSIDMAKGLEFDNVILHNPNVNRYSDNKRDKKILYTAISRGMKRVVLPYTGT
LSEWFTPYLAAR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgaaaaattttatgaacaacagcatttaacaacggtttatcatgagctgcaa
gcggctaaaaaagtttacgaagagcaattggcgaacacaatgaaagatggcaaacatatg
ctagaggaatttggtcgcgattctaagctgaattttgatagttatgccgataatctagaa
acgtttgccatgttggaaatgaagaaccgtgaaattgatcagtggaacttaaaaaatgaa
gcaacggctaaaaatttagacaaagtgaaacgcctattacaagttccttattttggcaaa
attggcgtgacttttgaagacagccctgaagagccagaaaacttttatattggcgtaaac
gattttacttctttagaagaagaaacgcgcattcacgattggcgctcaccgattgcttcg
ttattttatgacaatgttttagggaaaacagcctacatggcacatcaacaaaccattcct
gtacaacttgatttgaaaagacagttaattattgaaaaagatcaattaatcaactatttt
gacacaaccattgcgattcaagatgatgtgttattgcattctttagaagaagatgcttct
ccttatatgaaggacattacgacaaccattcaacaagaacaaaatcaaataattcgtgac
gaaacgcagccactcctactagtcaacgggattgctggtagtgggaaaacgtctgcgatt
atgcaacggattgcttatttactttatcaacatcgagcagaaattacagcggataatatt
ttattactttcaccaaattcaacatttattgattatatttctcaagttttaccgaattta
ggcgaacgaaatcccttgaatttgactcttttacaatttttgcgcttcactaccaaagaa
gcatggccaatggaagaagaaacggactatttcgaacgcattactcgctctgaggcaacg
gagcaagagcacgttattcgttcaaaagaatttgcaacgtttcttttaagcaatcctgaa
aaagcggttgtgcagccacattttttccgtcctttaacttttaaaaagcagaccttattt
acttcagaaacaatttttaaactttatcaagaaacaccagctgacttgagtattcgccaa
cgaatttcagccacaaaagaaaaattaaccagtctttggacacgttatctattaaaacaa
gcccattctaaaaaaatgttggatcaattccaagatttaacagaagctgaacaagttcgt
tattttggcacagtgattaccgaagataatgaaaaacatctggctgattttgctttaaaa
cgtttgaagaaaaaatatcgctctatcactgccgctattaaaaatgatgcttggctagat
caatgggccttttttgaaacgttttattctttattcactgaaaaatcgtatcaaaaagag
acagctgttttcacagccgatgaaattgtggcccttattttggtgaaacatgcatttatt
gaaaacctcgccaaccagcaaatggcttttatcctagtcgatgaagtccaagattataca
gaagcccaattattattactgctgacacttttccctaaagctagttttactttagctggt
gatgaaaatcaagccatttttaatacagccattgaattttctgaagcccatgatttattg
gttaacgaaaccagccgttctgttggaacctatcaattattaaacagctatcgttcaagt
aaagaaattacacgactcttccaaacattaggcactcaaccagagcaattaaccattgtg
cccatccggcatgatggagaaaagccgacatttattccttgtgactctgcgtctgactat
cttaaagcaatcgtcacttccattgcaacttttgatccgaaagaaagcaccgccattatt
actaaaacatttgcagaaaaagaacaattaacaaaagaacttagtgcttctctttcattg
gaagaacatccgtcactgcaagttttatcaattgatatggcaaaaggtctagaatttgat
aatgtaattcttcataacccaaatgttaatcgttattccgacaataaacgagataaaaaa
atcctgtatactgctatttctcgtggaatgaaacgggtcgttttaccttataccggcaca
ctttctgaatggtttacaccttacttggcagcccggtaa
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