Enterococcus faecalis DENG1: DENG_01538
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Entry
DENG_01538 CDS
T03043
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
efn
Enterococcus faecalis DENG1
Brite
KEGG Orthology (KO) [BR:
efn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efn03019
]
DENG_01538
03009 Ribosome biogenesis [BR:
efn03009
]
DENG_01538
Enzymes [BR:
efn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DENG_01538
Messenger RNA biogenesis [BR:
efn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DENG_01538
Ribosome biogenesis [BR:
efn03009
]
Prokaryotic type
rRNA helicases
DENG_01538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Microtub_bd
NAT10_TcmA_helicase
CMS1
Motif
Other DBs
NCBI-ProteinID:
AHI40514
LinkDB
All DBs
Position
1364382..1365731
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AA seq
449 aa
AA seq
DB search
MPSFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPL
MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLK
HQQPHVVIGTPGRILDMMNEQALKVHTAFAFVVDEADMTLDMGFLAEVDQIAGRLPEKLQ
MLVFSATIPEKLRPFLKKYLENPVIEHIKPKAVISETIDNWLISTKGKNSNQIIYQLLTI
GHPYLAIVFANTKQRVDEITDYLKDQGLKVAKIHGDITPRERKRVMRQVQNLDYQYVVAT
DLAARGIDIEGVSHVINAEVPHELDFFIHRVGRTGRNGLNGTAITLYSPADDEAITQIEQ
LGVSFKPKEIKNGEIVETYDRNRRTKREKSREELDPTLIGLVKKKKKKIKPGYKKKINWA
IEDSNKKKRKIERRQKDRSARKAKKNSSN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcatttaaacaatttcaatttcaaccttttatcaacgaagcactcgcagaaaaa
gggtttgaagaaccaacagaagtccaagaaaaattaatcccaatcattaagaaagggaaa
agtgttattggacaatcgcaaacaggaagtggaaagacgcatacgtttttacttccatta
atggataaagttaagccaactatcgacgaagtacaaattgtgattactgcgcctagtcgt
gaattagccaatcaaatttatcaagaagcgcagcaactggctcgtttcagtcaaccagaa
attcgagtgtcaaattttgttggcggaacagataaacaacgtcaattaaataaattaaag
catcaacaacctcatgtggtgattggtacaccagggcggattttagatatgatgaatgaa
caagccttgaaagtgcatacggcttttgcctttgttgtcgatgaagcagacatgacatta
gatatgggctttttagcagaagtcgatcaaattgctggtcgtttgccagaaaaattacaa
atgctcgttttttctgcaaccattccagaaaaattacgaccatttttaaaaaaatattta
gaaaatccagtgattgaacatatcaaaccaaaagcagttatttcagaaacaattgacaat
tggttgatttccaccaaaggaaaaaacagcaatcaaataatttatcaattattgactatc
ggacatccttatttagcgattgtttttgcaaatacgaaacaaagagttgatgaaatcacc
gattacttaaaagatcagggcctaaaagttgccaaaattcatggagacattacaccacgc
gaaagaaaacgtgtgatgcgtcaagttcaaaatcttgactaccaatatgtggtagctact
gatttagccgcacgtgggattgatattgaaggggtttcacatgtcatcaatgcagaagtt
ccacatgaattggacttctttatccatcgggttggccgcacaggacgtaatggattgaat
gggactgccataacattatattcaccagcagatgatgaagcgattactcagattgagcag
ttaggtgtttctttcaaaccaaaagaaattaaaaatggtgagattgtagagacgtatgat
cgcaaccgtcgaacaaaacgagaaaaatctcgagaagaattagacccaacgttaattggt
ttagtgaaaaagaaaaagaaaaaaattaaaccaggatacaagaaaaaaattaattgggca
attgaagacagcaataagaaaaaacgtaaaattgaacgtcgtcaaaaagatcgttctgct
agaaaagcaaaaaagaattcttctaactaa
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